RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 KRTAP10-4P60372 401 aaPredicted RBP0.6□□□□□ -2.31
SYPL1-203ENST00000460770 COX17Q14061 63 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 PYY3Q5JQD4 70 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 C6orf52Q5T4I8 152 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 CFAP126Q5VTH2 177 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 SMIM11BQ8TCY0 68 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 PRR15LQ9BU68 103 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 PRO1933Q9H354 126 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 CACFD1Q9UGQ2 172 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 ZNF609O15014 1411 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 TEX14Q8IWB6 1497 aa0.6□□□□□ -2.31
SYPL1-203ENST00000460770 ARHGAP5Q13017 1502 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 ZFYVE16Q7Z3T8 1539 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 ABCC5O15440 1437 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 A0A087WTM6 91 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 C7orf77A4D0Y5 90 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 MGPP08493 103 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 SAA2P0DJI9 122 aaPredicted RBP0.59□□□□□ -2.31
SYPL1-203ENST00000460770 ZNF137PP52743 207 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 HAMPP81172 84 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 PEA15Q15121 130 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 SPINK9Q5DT21 86 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 PSMG4Q5JS54 123 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 Q5VV11 94 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 Q6ZRX8 168 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 ZNF720Q7Z2F6 126 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 FDCSPQ8NFU4 85 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 S100A16Q96FQ6 103 aaKnown RBP0.59□□□□□ -2.31
SYPL1-203ENST00000460770 Q96NJ1 140 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 AMELXQ99217 191 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 LINC01558Q9Y6Z2 57 aa0.59□□□□□ -2.31
SYPL1-203ENST00000460770 TANC1Q9C0D5 1861 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 ANKRD36BQ8N2N9 1353 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 SYS1-DBNDD2H3BUS1 97 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 PIN1P1O15428 100 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 UBE2D3P61077 147 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 RPL37P61927 97 aaKnown RBP0.58□□□□□ -2.32
SYPL1-203ENST00000460770 UBE2D2P62837 147 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 FAM223AQ8IWN6 122 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 C9orf62Q8N4C0 152 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 S100A13Q99584 98 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 CDC42SE2Q9NRR3 84 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 RABAC1Q9UI14 185 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 MAP2P11137 1827 aaKnown RBP0.58□□□□□ -2.32
SYPL1-203ENST00000460770 FYCO1Q9BQS8 1478 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 DNAJC13O75165 2243 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 QRICH2Q9H0J4 1663 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 ROBO1Q9Y6N7 1651 aa0.58□□□□□ -2.32
SYPL1-203ENST00000460770 PLEKHH2Q8IVE3 1493 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 TRBV25-1A0A075B6N4 114 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 A0A096LNT2 108 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 GVQW2A0A096LPI5 108 aaPredicted RBP0.57□□□□□ -2.32
SYPL1-203ENST00000460770 TRBV7-7A0A0K0K1E9 115 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 FAM223BA6NKX1 122 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 ETDBQ3ZM63 59 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 UBE2DNLQ8IWF7 75 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 LCN9Q8WX39 176 aa0.57□□□□□ -2.32
SYPL1-203ENST00000460770 TNS1Q9HBL0 1735 aaKnown RBP0.57□□□□□ -2.32
SYPL1-203ENST00000460770 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
SYPL1-203ENST00000460770 BAZ1AQ9NRL2 1556 aaPredicted RBP0.57□□□□□ -2.32
SYPL1-203ENST00000460770 MRC1P22897 1456 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 RAPGEF2Q9Y4G8 1499 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 PRDM2Q13029 1718 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 CACNA1CQ13936 2221 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 DOPEY2Q9Y3R5 2298 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 KANTRA0A1W2PQU2 76 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 D6R8Y8 96 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 K7EIL1 84 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 K7EP34 96 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 BCE1O60756 84 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 LEPROTL1O95214 131 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 GNGT1P63211 74 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 HMGN3Q15651 99 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 ADIRFQ15847 76 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 Q6JHZ5 121 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 ALKAL2Q6UX46 152 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 MUSTN1Q8IVN3 82 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 TMEM263Q8WUH6 116 aaKnown RBP0.56□□□□□ -2.32
SYPL1-203ENST00000460770 C20orf78Q9BR46 151 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 PROK2Q9HC23 129 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 PLCE1Q9P212 2302 aa0.56□□□□□ -2.32
SYPL1-203ENST00000460770 GAPVD1Q14C86 1478 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 MLH3Q9UHC1 1453 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 SHANK2Q9UPX8 1470 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 MYO7BQ6PIF6 2116 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 ZMYM4Q5VZL5 1548 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 A0A0D9SFI3 127 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 H3BQF6 201 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 H7BZZ5 65 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 NMBP08949 121 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 ARMS2P0C7Q2 107 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 LRRC37A3O60309 1634 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 SPTBN2O15020 2390 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 PLIN4Q96Q06 1357 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 EDC4Q6P2E9 1401 aaKnown RBP0.55□□□□□ -2.32
SYPL1-203ENST00000460770 JMJD1CQ15652 2540 aa0.55□□□□□ -2.32
SYPL1-203ENST00000460770 PXDNQ92626 1479 aa0.54□□□□□ -2.32
SYPL1-203ENST00000460770 MAGI1Q96QZ7 1491 aaPredicted RBP0.54□□□□□ -2.32
SYPL1-203ENST00000460770 F8WEM9 126 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms