RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 OR2D3Q8NGH3 330 aa4.85□□□□□ -1.63
HPS4-207ENST00000459918 DIRC1Q969H9 104 aa4.85□□□□□ -1.63
HPS4-207ENST00000459918 C11orf52Q96A22 123 aa4.85□□□□□ -1.63
HPS4-207ENST00000459918 MANBALQ9NQG1 85 aa4.85□□□□□ -1.63
HPS4-207ENST00000459918 TRBV20OR9-2A0A075B6H5 130 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 TRAV1-1A0A0B4J248 108 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 C19orf71A6NCJ1 209 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 FGF6P10767 208 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 MALP21145 153 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 CAMPP49913 170 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 RPS20P60866 119 aaKnown RBP4.84□□□□□ -1.63
HPS4-207ENST00000459918 FOXI1Q12951 378 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 SS18Q15532 418 aa4.84□□□□□ -1.63
HPS4-207ENST00000459918 BCL2P10415 239 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 NTF3P20783 257 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 GNG4P50150 75 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 MEF2BQ02080 365 aaPredicted RBP4.83□□□□□ -1.64
HPS4-207ENST00000459918 TWIST1Q15672 202 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 EIF5AL1Q6IS14 154 aaKnown RBP4.83□□□□□ -1.64
HPS4-207ENST00000459918 LYZL1Q6UWQ5 148 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 MED9Q9NWA0 146 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 MUC2Q02817 5179 aa4.83□□□□□ -1.64
HPS4-207ENST00000459918 IGLV4-69A0A075B6H9 119 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 A0A087WZ39 114 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 TMEM238LA0A1B0GVL6 79 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 F2Z2F3 143 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 NCR2O95944 276 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 IFNA1P01562 189 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
HPS4-207ENST00000459918 Q6ZNX1 250 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
HPS4-207ENST00000459918 SMIM15Q7Z3B0 74 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 NUDT10Q8NFP7 164 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 NUDT11Q96G61 164 aa4.82□□□□□ -1.64
HPS4-207ENST00000459918 LINC00959A0A1B0GUT2 108 aa4.81□□□□□ -1.64
HPS4-207ENST00000459918 TEX46H3BTG2 121 aa4.81□□□□□ -1.64
HPS4-207ENST00000459918 H7C423 109 aa4.81□□□□□ -1.64
HPS4-207ENST00000459918 PDE6DO43924 150 aa4.81□□□□□ -1.64
HPS4-207ENST00000459918 APOMO95445 188 aa4.81□□□□□ -1.64
HPS4-207ENST00000459918 PMCHP20382 165 aa4.81□□□□□ -1.64
HPS4-207ENST00000459918 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
HPS4-207ENST00000459918 RNASE7Q9H1E1 156 aaKnown RBP4.81□□□□□ -1.64
HPS4-207ENST00000459918 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 A0A1W2PNN7 141 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 H0Y9J4 135 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 K7EN84 100 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 COX7A2LO14548 114 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 FOXA3P55318 350 aaPredicted RBP4.8□□□□□ -1.64
HPS4-207ENST00000459918 CD164L2Q6UWJ8 174 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 TCTE3Q8IZS6 198 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 C9orf62Q8N4C0 152 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 OCC1Q8TAD7 63 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 TSKUQ8WUA8 353 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 RPL39LQ96EH5 51 aaKnown RBP4.8□□□□□ -1.64
HPS4-207ENST00000459918 SMIM12Q96EX1 92 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
HPS4-207ENST00000459918 SDHAF1A6NFY7 115 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 I3L3M4 83 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 CTRLP40313 264 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 RPL13AP40429 203 aaKnown RBP4.79□□□□□ -1.64
HPS4-207ENST00000459918 UBE2BP63146 152 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 SLC51BQ86UW2 128 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 GATD1Q8NB37 220 aa4.79□□□□□ -1.64
HPS4-207ENST00000459918 TSPAN13O95857 204 aa4.78□□□□□ -1.64
HPS4-207ENST00000459918 TEX261Q6UWH6 196 aa4.78□□□□□ -1.64
HPS4-207ENST00000459918 FAM19A5Q7Z5A7 132 aaPredicted RBP4.78□□□□□ -1.64
HPS4-207ENST00000459918 NUP35Q8NFH5 326 aa4.78□□□□□ -1.64
HPS4-207ENST00000459918 OPRPNQ99935 248 aaPredicted RBP4.78□□□□□ -1.64
HPS4-207ENST00000459918 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
HPS4-207ENST00000459918 BIN3Q9NQY0 253 aa4.78□□□□□ -1.64
HPS4-207ENST00000459918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.77□□□□□ -1.65
HPS4-207ENST00000459918 SPAG11BQ08648 103 aa4.77□□□□□ -1.65
HPS4-207ENST00000459918 ALKAL2Q6UX46 152 aa4.77□□□□□ -1.65
HPS4-207ENST00000459918 CNFNQ9BYD5 112 aa4.77□□□□□ -1.65
HPS4-207ENST00000459918 TMEM242Q9NWH2 141 aa4.77□□□□□ -1.65
HPS4-207ENST00000459918 hCG_2014768A0A024R1R8 64 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 TRAV13-1A0A0B4J241 112 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 C7orf77A4D0Y5 90 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 C1orf196B1AJZ1 125 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 FCER1GP30273 86 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 CEBPGP53567 150 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 C5orf38Q86SI9 138 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 BORCS7Q96B45 105 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 ST20Q9HBF5 79 aa4.76□□□□□ -1.65
HPS4-207ENST00000459918 FAM168BA1KXE4 195 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
HPS4-207ENST00000459918 TAGLN2P37802 199 aaKnown RBP4.75□□□□□ -1.65
HPS4-207ENST00000459918 SMAGPQ0VAQ4 97 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 GAGE2EQ4V326 116 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 RNASE13Q5GAN3 156 aaKnown RBP4.75□□□□□ -1.65
HPS4-207ENST00000459918 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 C2orf48Q96LS8 159 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 IMMP2LQ96T52 175 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 CDC42SE2Q9NRR3 84 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 GAGE2DQ9UEU5 116 aa4.75□□□□□ -1.65
HPS4-207ENST00000459918 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms