RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 TNFRSF6BO95407 300 aa8.49□□□□□ -1.05
SNHG17-208ENST00000456953 NPYP01303 97 aa8.49□□□□□ -1.05
SNHG17-208ENST00000456953 UBE2D3P61077 147 aa8.49□□□□□ -1.05
SNHG17-208ENST00000456953 UBE2D2P62837 147 aa8.49□□□□□ -1.05
SNHG17-208ENST00000456953 NRACQ8N912 160 aa8.49□□□□□ -1.05
SNHG17-208ENST00000456953 LAMTOR2Q9Y2Q5 125 aa8.49□□□□□ -1.05
SNHG17-208ENST00000456953 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
SNHG17-208ENST00000456953 PHOX2AO14813 284 aa8.48□□□□□ -1.05
SNHG17-208ENST00000456953 LINC00694P0DN24 101 aa8.48□□□□□ -1.05
SNHG17-208ENST00000456953 SUMO2P61956 95 aaKnown RBP8.48□□□□□ -1.05
SNHG17-208ENST00000456953 C20orf78Q9BR46 151 aa8.48□□□□□ -1.05
SNHG17-208ENST00000456953 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
SNHG17-208ENST00000456953 PMCHP20382 165 aa8.47□□□□□ -1.05
SNHG17-208ENST00000456953 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
SNHG17-208ENST00000456953 I3L3M4 83 aa8.46□□□□□ -1.06
SNHG17-208ENST00000456953 VCYO14598 125 aa8.46□□□□□ -1.06
SNHG17-208ENST00000456953 COTL1Q14019 142 aa8.46□□□□□ -1.06
SNHG17-208ENST00000456953 NIT1Q86X76 327 aa8.46□□□□□ -1.06
SNHG17-208ENST00000456953 UBE2WQ96B02 151 aa8.46□□□□□ -1.06
SNHG17-208ENST00000456953 ALKBH7Q9BT30 221 aaPredicted RBP8.46□□□□□ -1.06
SNHG17-208ENST00000456953 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
SNHG17-208ENST00000456953 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
SNHG17-208ENST00000456953 TRGC2P03986 189 aa8.45□□□□□ -1.06
SNHG17-208ENST00000456953 FCER1GP30273 86 aa8.45□□□□□ -1.06
SNHG17-208ENST00000456953 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
SNHG17-208ENST00000456953 KIR2DL4Q99706 377 aa8.45□□□□□ -1.06
SNHG17-208ENST00000456953 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
SNHG17-208ENST00000456953 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
SNHG17-208ENST00000456953 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
SNHG17-208ENST00000456953 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
SNHG17-208ENST00000456953 A0A087WX48 190 aa8.43□□□□□ -1.06
SNHG17-208ENST00000456953 AMTP48728 403 aa8.43□□□□□ -1.06
SNHG17-208ENST00000456953 POLR2KP53803 58 aaKnown RBP8.43□□□□□ -1.06
SNHG17-208ENST00000456953 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
SNHG17-208ENST00000456953 Q0VG73 95 aa8.43□□□□□ -1.06
SNHG17-208ENST00000456953 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
SNHG17-208ENST00000456953 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
SNHG17-208ENST00000456953 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
SNHG17-208ENST00000456953 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
SNHG17-208ENST00000456953 TRBV6-8A0A0A6YYG3 113 aa8.42□□□□□ -1.06
SNHG17-208ENST00000456953 IGHV1-24A0A0C4DH33 117 aa8.42□□□□□ -1.06
SNHG17-208ENST00000456953 TCAPO15273 167 aa8.42□□□□□ -1.06
SNHG17-208ENST00000456953 Q8N8P6 123 aa8.42□□□□□ -1.06
SNHG17-208ENST00000456953 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
SNHG17-208ENST00000456953 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
SNHG17-208ENST00000456953 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 PANO1I0J062 215 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 TSHBP01222 138 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 NTM-AS1Q6ZSK4 140 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 CHCHD5Q9BSY4 110 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
SNHG17-208ENST00000456953 TMEM262E9PQX1 116 aa8.4□□□□□ -1.06
SNHG17-208ENST00000456953 UBE2L6O14933 153 aa8.4□□□□□ -1.06
SNHG17-208ENST00000456953 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
SNHG17-208ENST00000456953 IQCJQ1A5X6 159 aa8.4□□□□□ -1.06
SNHG17-208ENST00000456953 FA2HQ7L5A8 372 aa8.4□□□□□ -1.06
SNHG17-208ENST00000456953 LINC01600Q96MT4 127 aa8.4□□□□□ -1.06
SNHG17-208ENST00000456953 PRSS1P07477 247 aa8.39□□□□□ -1.07
SNHG17-208ENST00000456953 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
SNHG17-208ENST00000456953 C18orf32Q8TCD1 76 aa8.39□□□□□ -1.07
SNHG17-208ENST00000456953 C1orf196B1AJZ1 125 aa8.38□□□□□ -1.07
SNHG17-208ENST00000456953 K7EMI3 77 aa8.38□□□□□ -1.07
SNHG17-208ENST00000456953 RAB5BP61020 215 aa8.38□□□□□ -1.07
SNHG17-208ENST00000456953 PKIAP61925 76 aa8.38□□□□□ -1.07
SNHG17-208ENST00000456953 GAGE6Q13070 117 aa8.38□□□□□ -1.07
SNHG17-208ENST00000456953 CIRBPQ14011 172 aaKnown RBP8.38□□□□□ -1.07
SNHG17-208ENST00000456953 BAGE3Q86Y29 109 aa8.38□□□□□ -1.07
SNHG17-208ENST00000456953 CRPP02741 224 aa8.37□□□□□ -1.07
SNHG17-208ENST00000456953 ODF1Q14990 250 aa8.37□□□□□ -1.07
SNHG17-208ENST00000456953 ORMDL2Q53FV1 153 aa8.37□□□□□ -1.07
SNHG17-208ENST00000456953 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
SNHG17-208ENST00000456953 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
SNHG17-208ENST00000456953 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
SNHG17-208ENST00000456953 TMEM18Q96B42 140 aa8.37□□□□□ -1.07
SNHG17-208ENST00000456953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
SNHG17-208ENST00000456953 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
SNHG17-208ENST00000456953 LINC00614P0C842 121 aa8.36□□□□□ -1.07
SNHG17-208ENST00000456953 G0S2P27469 103 aa8.36□□□□□ -1.07
SNHG17-208ENST00000456953 AP5S1Q9NUS5 200 aa8.36□□□□□ -1.07
SNHG17-208ENST00000456953 H7C423 109 aa8.35□□□□□ -1.07
SNHG17-208ENST00000456953 ESDP10768 282 aa8.35□□□□□ -1.07
SNHG17-208ENST00000456953 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
SNHG17-208ENST00000456953 C20orf203Q8NBC4 194 aa8.35□□□□□ -1.07
SNHG17-208ENST00000456953 MUC2Q02817 5179 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
SNHG17-208ENST00000456953 LPAP08519 4548 aa8.33□□□□□ -1.08
SNHG17-208ENST00000456953 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
SNHG17-208ENST00000456953 FGF6P10767 208 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms