RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 PSMB8P28062 276 aa13.74□□□□□ -0.21
SEMA3B-208ENST00000456210 ATP5J2P56134 94 aa13.74□□□□□ -0.21
SEMA3B-208ENST00000456210 C10orf105Q8TEF2 133 aa13.74□□□□□ -0.21
SEMA3B-208ENST00000456210 IGHV3-73A0A0B4J1V6 119 aa13.73□□□□□ -0.21
SEMA3B-208ENST00000456210 RBMY1A1P0DJD3 496 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-208ENST00000456210 RBMY1CP0DJD4 496 aa13.73□□□□□ -0.21
SEMA3B-208ENST00000456210 RBMY1FQ15415 496 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-208ENST00000456210 CIRBPQ14011 172 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-208ENST00000456210 CFAP161Q6P656 301 aa13.73□□□□□ -0.21
SEMA3B-208ENST00000456210 SDIM1Q6ZPB5 146 aa13.72□□□□□ -0.21
SEMA3B-208ENST00000456210 DAND5Q8N907 189 aa13.72□□□□□ -0.21
SEMA3B-208ENST00000456210 LINC00308Q8TCZ7 52 aa13.72□□□□□ -0.21
SEMA3B-208ENST00000456210 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 LINC00467Q9BRT7 94 aa13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 CDKN2A-AS1Q9UH64 79 aa13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 SETXQ7Z333 2677 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 FAM236AA0A1B0GUQ0 79 aa13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 FAM236BA0A1B0GV22 79 aa13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 IGKV2-29A2NJV5 120 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-208ENST00000456210 CELSR1Q9NYQ6 3014 aa13.71□□□□□ -0.22
SEMA3B-208ENST00000456210 LINC00643Q86TS7 51 aa13.7□□□□□ -0.22
SEMA3B-208ENST00000456210 PDZD2O15018 2839 aa13.7□□□□□ -0.22
SEMA3B-208ENST00000456210 COPS9Q8WXC6 57 aa13.7□□□□□ -0.22
SEMA3B-208ENST00000456210 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
SEMA3B-208ENST00000456210 SMCR5Q8TEV8 140 aa13.69□□□□□ -0.22
SEMA3B-208ENST00000456210 DNAJC30Q96LL9 226 aa13.69□□□□□ -0.22
SEMA3B-208ENST00000456210 TRACP01848 142 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 BEAN1Q3B7T3 259 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 Q9UF83 564 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 NOTCH2Q04721 2471 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 A8MTW9 85 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 Q6ZSN1 163 aa13.68□□□□□ -0.22
SEMA3B-208ENST00000456210 ZNF469Q96JG9 3925 aaPredicted RBP13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 IGHV4-30-2A0A087WSY4 118 aa13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 ATP5G1P05496 136 aa13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 DUX5Q96PT3 197 aa13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 TMEM95Q3KNT9 176 aa13.67□□□□□ -0.22
SEMA3B-208ENST00000456210 CCDC168Q8NDH2 2452 aa13.66□□□□□ -0.22
SEMA3B-208ENST00000456210 PPDPFQ9H3Y8 114 aa13.66□□□□□ -0.22
SEMA3B-208ENST00000456210 Q9H8V8 135 aa13.66□□□□□ -0.22
SEMA3B-208ENST00000456210 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 ZNF415Q09FC8 603 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 FAM19A3Q7Z5A8 133 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 KNCNA6PVL3 124 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 DSCR9P59020 149 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 HERVK_113P63121 156 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 PEMTQ9UBM1 199 aa13.65□□□□□ -0.22
SEMA3B-208ENST00000456210 CXCL5P42830 114 aa13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 DAZ2Q13117 558 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 FAM222AQ5U5X8 452 aa13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 DAZ4Q86SG3 579 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 C3orf22Q8N5N4 141 aa13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 DAZ3Q9NR90 486 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-208ENST00000456210 MSMBP08118 114 aa13.63□□□□□ -0.23
SEMA3B-208ENST00000456210 HTN1P15515 57 aa13.63□□□□□ -0.23
SEMA3B-208ENST00000456210 SYNJ2BPP57105 145 aa13.63□□□□□ -0.23
SEMA3B-208ENST00000456210 COX6A2Q02221 97 aa13.63□□□□□ -0.23
SEMA3B-208ENST00000456210 Q8N2B8 174 aa13.63□□□□□ -0.23
SEMA3B-208ENST00000456210 IGHV3OR16-12A0A075B7B8 117 aa13.62□□□□□ -0.23
SEMA3B-208ENST00000456210 UQCRQO14949 82 aa13.62□□□□□ -0.23
SEMA3B-208ENST00000456210 C22orf24Q9Y442 160 aa13.62□□□□□ -0.23
SEMA3B-208ENST00000456210 LINC00242Q5T6M2 205 aa13.62□□□□□ -0.23
SEMA3B-208ENST00000456210 C10orf99Q6UWK7 81 aa13.62□□□□□ -0.23
SEMA3B-208ENST00000456210 C5orf38Q86SI9 138 aa13.62□□□□□ -0.23
SEMA3B-208ENST00000456210 IGHV3-38A0A0C4DH36 116 aa13.61□□□□□ -0.23
SEMA3B-208ENST00000456210 VPREB3Q9UKI3 123 aa13.61□□□□□ -0.23
SEMA3B-208ENST00000456210 BAALC-AS2P0C853 105 aa13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 B4DSR2 109 aa13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 C9orf153Q5TBE3 101 aa13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 C3orf56Q8N813 242 aa13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 LINC00526Q96FQ7 95 aa13.6□□□□□ -0.23
SEMA3B-208ENST00000456210 ZANQ9Y493 2812 aa13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 RBMY1BA6NDE4 496 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 RBMY1EA6NEQ0 496 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 NDUFA7O95182 113 aa13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 RBMY1DP0C7P1 496 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 INAFM2P0DMQ5 153 aa13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 DGAT2L7PQ6IED9 249 aa13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 C11orf72Q8NBR9 251 aa13.59□□□□□ -0.23
SEMA3B-208ENST00000456210 AKAP9Q99996 3911 aa13.58□□□□□ -0.24
SEMA3B-208ENST00000456210 RS1O15537 224 aa13.57□□□□□ -0.24
SEMA3B-208ENST00000456210 PRM2P04554 102 aa13.57□□□□□ -0.24
SEMA3B-208ENST00000456210 TEX15Q9BXT5 2789 aa13.57□□□□□ -0.24
SEMA3B-208ENST00000456210 FAM218AQ96MZ4 157 aa13.57□□□□□ -0.24
SEMA3B-208ENST00000456210 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-208ENST00000456210 DEFB131AP59861 70 aa13.56□□□□□ -0.24
SEMA3B-208ENST00000456210 CSDC2Q9Y534 153 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-208ENST00000456210 PRIMA1Q86XR5 153 aa13.55□□□□□ -0.24
SEMA3B-208ENST00000456210 A0A0U1RRA0 63 aa13.55□□□□□ -0.24
SEMA3B-208ENST00000456210 PF4P02776 101 aa13.55□□□□□ -0.24
SEMA3B-208ENST00000456210 HIST1H4AP62805 103 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-208ENST00000456210 MYO9AB2RTY4 2548 aa13.55□□□□□ -0.24
SEMA3B-208ENST00000456210 F5H768 121 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms