RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 E7EQL1 145 aa3.98□□□□□ -1.77
CSMD3-204ENST00000455883 WT1P19544 449 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-204ENST00000455883 GYPEP15421 78 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 NDPQ00604 133 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 IGHV7-81A0A0B4J1V7 117 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 TMEM223A0PJW6 202 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 CRYGAP11844 174 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 ZNF22P17026 224 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-204ENST00000455883 EBI3Q14213 229 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 APCP25054 2843 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 C3orf56Q8N813 242 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 NRGNQ92686 78 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 IGKV4-1P06312 121 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 MIR7-3HGQ8N6C7 128 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 C5orf56Q8N8D9 126 aa3.97□□□□□ -1.77
CSMD3-204ENST00000455883 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
CSMD3-204ENST00000455883 LINC00322Q6ZN03 302 aaPredicted RBP3.96□□□□□ -1.78
CSMD3-204ENST00000455883 IGHV3-73A0A0B4J1V6 119 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 XCL2Q9UBD3 114 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 WFDC11Q8NEX6 87 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 NOP10Q9NPE3 64 aaKnown RBP3.95□□□□□ -1.78
CSMD3-204ENST00000455883 CELA1Q9UNI1 258 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 S4R3C0 116 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 PATE3B3GLJ2 98 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 DEFB114Q30KQ6 69 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 IGKV2D-24A0A075B6R9 120 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 TRIAP1O43715 76 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 CCKP06307 115 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 KLLNB2CW77 178 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 VWCEQ96DN2 955 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 LINC00467Q9BRT7 94 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 Q8N976 141 aa3.95□□□□□ -1.78
CSMD3-204ENST00000455883 M0R378 163 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 RETNQ9HD89 108 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 ITPR1Q14643 2758 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 IGHV3OR16-8A0A075B7F1 116 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 LINC01546A6NGU7 62 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 Q6ZR03 302 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 HCG22E2RYF7 251 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 M0QY20 66 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 RSPO1Q2MKA7 263 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-204ENST00000455883 H0Y9J4 135 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 MT-ATP8P03928 68 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 IGKV3D-7A0A0C4DH55 119 aa3.94□□□□□ -1.78
CSMD3-204ENST00000455883 Q96MF0 132 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 CYP4F30PQ9H0H9 118 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 CGB7P0DN87 165 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 RPL35AP18077 110 aaKnown RBP3.93□□□□□ -1.78
CSMD3-204ENST00000455883 ESRGQ1W209 222 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 C11orf53Q8IXP5 236 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 IGHV3-16A0A0C4DH30 117 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
CSMD3-204ENST00000455883 C2orf91Q6ZV80 131 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 ODF3BA8MYP8 253 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 SEM1Q6ZVN7 128 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 RPL39LQ96EH5 51 aaKnown RBP3.93□□□□□ -1.78
CSMD3-204ENST00000455883 SIRPDQ9H106 197 aa3.93□□□□□ -1.78
CSMD3-204ENST00000455883 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-204ENST00000455883 Q0VFX4 171 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 CGB3P0DN86 165 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 PRYO14603 147 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 IGLV2-23P01705 113 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 NTM-AS1Q6ZSK4 140 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 RSPO4Q2I0M5 234 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-204ENST00000455883 PLA2G2CQ5R387 149 aa3.92□□□□□ -1.78
CSMD3-204ENST00000455883 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 TRBV6-8A0A0A6YYG3 113 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 CHD9Q3L8U1 2897 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 ENHOQ6UWT2 76 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 XAGE1AQ9HD64 81 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 REG3AQ06141 175 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 C7orf33Q8WU49 177 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 CLEC2BQ92478 149 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 IGLV2-14P01704 120 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 POLR2KP53803 58 aaKnown RBP3.91□□□□□ -1.78
CSMD3-204ENST00000455883 EGFEM1PQ0D2K5 195 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 A0A087WV48 116 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 SDIM1Q6ZPB5 146 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 Q8N2B8 174 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.91□□□□□ -1.78
CSMD3-204ENST00000455883 IGKV2-29A2NJV5 120 aaPredicted RBP3.91□□□□□ -1.78
CSMD3-204ENST00000455883 IGKV1OR2-108A0A075B7D4 117 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 C2orf48Q96LS8 159 aa3.91□□□□□ -1.78
CSMD3-204ENST00000455883 PINLYPA6NC86 204 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 C10orf25Q5T742 122 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 CLPSL1A2RUU4 121 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 K7EQG2 157 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 Q8N9W7 124 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 SMAD5-AS1Q9Y6J3 95 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 G3V318 75 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 LELP1Q5T871 98 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 PIP4P1Q86T03 277 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 DNAJC9-AS1A6NH13 148 aa3.9□□□□□ -1.78
CSMD3-204ENST00000455883 PROK2Q9HC23 129 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 451.7 ms