RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 IGHV3-30-3P0DP02 117 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 IGHV3-30-5P0DP03 117 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 MRPS36P82909 103 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 OR5A1Q8NGJ0 315 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 SCGB3A1Q96QR1 104 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 IGLV4-3A0A075B6K6 122 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 K7EP13 123 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 TMA7Q9Y2S6 64 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-202ENST00000455220 SNRPEP62304 92 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-202ENST00000455220 Q6ZUT4 128 aa11.23□□□□□ -0.61
CCDC90B-202ENST00000455220 HIST3H2BBQ8N257 126 aa11.23□□□□□ -0.61
CCDC90B-202ENST00000455220 PACRGQ96M98 296 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-202ENST00000455220 LEPROTL1O95214 131 aa11.22□□□□□ -0.61
CCDC90B-202ENST00000455220 LY6G6CO95867 125 aa11.22□□□□□ -0.61
CCDC90B-202ENST00000455220 ZNF664Q8N3J9 261 aa11.22□□□□□ -0.61
CCDC90B-202ENST00000455220 OPRPNQ99935 248 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-202ENST00000455220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-202ENST00000455220 ATP5LO75964 103 aa11.21□□□□□ -0.61
CCDC90B-202ENST00000455220 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-202ENST00000455220 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
CCDC90B-202ENST00000455220 PRR34Q9NV39 138 aa11.21□□□□□ -0.61
CCDC90B-202ENST00000455220 RYR3Q15413 4870 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 AMELXQ99217 191 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 KRTAP1-5Q9BYS1 174 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
CCDC90B-202ENST00000455220 RYR2Q92736 4967 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 NBDYA0A0U1RRE5 68 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 IBA57-AS1B1ANH7 110 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 FABP4P15090 132 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 Q6ZN92 141 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 BAALCQ8WXS3 180 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
CCDC90B-202ENST00000455220 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-202ENST00000455220 HIST1H2BLQ99880 126 aa11.18□□□□□ -0.62
CCDC90B-202ENST00000455220 IFITM10A6NMD0 228 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 S100A2P29034 98 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 REG3AQ06141 175 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 TEX43Q6ZNM6 134 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 VCX2Q9H322 139 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
CCDC90B-202ENST00000455220 LCE6AA0A183 80 aa11.16□□□□□ -0.62
CCDC90B-202ENST00000455220 ZC2HC1BQ5TFG8 222 aa11.16□□□□□ -0.62
CCDC90B-202ENST00000455220 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
CCDC90B-202ENST00000455220 Q6ZR54 194 aa11.16□□□□□ -0.62
CCDC90B-202ENST00000455220 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
CCDC90B-202ENST00000455220 DNAH10Q8IVF4 4471 aa11.15□□□□□ -0.62
CCDC90B-202ENST00000455220 CRPP02741 224 aa11.15□□□□□ -0.62
CCDC90B-202ENST00000455220 PMVKQ15126 192 aa11.15□□□□□ -0.62
CCDC90B-202ENST00000455220 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
CCDC90B-202ENST00000455220 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
CCDC90B-202ENST00000455220 LINC00959A0A1B0GUT2 108 aa11.14□□□□□ -0.63
CCDC90B-202ENST00000455220 MIAQ16674 131 aa11.14□□□□□ -0.63
CCDC90B-202ENST00000455220 CST9LQ9H4G1 147 aa11.14□□□□□ -0.63
CCDC90B-202ENST00000455220 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
CCDC90B-202ENST00000455220 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
CCDC90B-202ENST00000455220 PRSS1P07477 247 aa11.13□□□□□ -0.63
CCDC90B-202ENST00000455220 UBE2D1P51668 147 aa11.13□□□□□ -0.63
CCDC90B-202ENST00000455220 MAP1LC3CQ9BXW4 147 aa11.13□□□□□ -0.63
CCDC90B-202ENST00000455220 TRAV13-1A0A0B4J241 112 aa11.12□□□□□ -0.63
CCDC90B-202ENST00000455220 TRAV8-4A0A0B4J246 113 aa11.12□□□□□ -0.63
CCDC90B-202ENST00000455220 IGKV3OR2-268A0A0C4DH90 116 aa11.12□□□□□ -0.63
CCDC90B-202ENST00000455220 CCL25O15444 150 aa11.12□□□□□ -0.63
CCDC90B-202ENST00000455220 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
CCDC90B-202ENST00000455220 M0R2N4 97 aa11.11□□□□□ -0.63
CCDC90B-202ENST00000455220 C3orf79P0CE67 100 aa11.11□□□□□ -0.63
CCDC90B-202ENST00000455220 SPATA12Q7Z6I5 190 aa11.11□□□□□ -0.63
CCDC90B-202ENST00000455220 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
CCDC90B-202ENST00000455220 SS18Q15532 418 aa11.1□□□□□ -0.63
CCDC90B-202ENST00000455220 Q9HAA7 133 aa11.1□□□□□ -0.63
CCDC90B-202ENST00000455220 ODF1Q14990 250 aa11.09□□□□□ -0.63
CCDC90B-202ENST00000455220 LINC00242Q5T6M2 205 aa11.09□□□□□ -0.63
CCDC90B-202ENST00000455220 CHCHD10Q8WYQ3 142 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-202ENST00000455220 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
CCDC90B-202ENST00000455220 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
CCDC90B-202ENST00000455220 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
CCDC90B-202ENST00000455220 RMI2Q96E14 147 aa11.08□□□□□ -0.64
CCDC90B-202ENST00000455220 C1orf43Q9BWL3 253 aa11.08□□□□□ -0.64
CCDC90B-202ENST00000455220 IGLV4-69A0A075B6H9 119 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 F8VRH5 84 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 H0Y8G0 127 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 KRTDAPP60985 99 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 DNAH17Q9UFH2 4485 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 TINCRA0A1B0GVN0 87 aa11.07□□□□□ -0.64
CCDC90B-202ENST00000455220 SEC11AP67812 179 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms