RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NBPF19A0A087WUL8 3843 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 SNCGO76070 127 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 TSPEAR-AS2P59090 65 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 RPL36AP83881 106 aaKnown RBP8.74□□□□□ -1.01
SMPD4-213ENST00000454468 RPL36ALQ969Q0 106 aaKnown RBP8.74□□□□□ -1.01
SMPD4-213ENST00000454468 CR1P17927 2039 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 HIGD1BQ9P298 99 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 NDUFA7O95182 113 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 CFAP126Q5VTH2 177 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 Q6ZUT4 128 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 LINC00467Q9BRT7 94 aa8.74□□□□□ -1.01
SMPD4-213ENST00000454468 CHCHD5Q9BSY4 110 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 IGLV4-3A0A075B6K6 122 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 M0QXV9 152 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 TSPAN13O95857 204 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 XGP55808 180 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 PTH2Q96A98 100 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 TENM4Q6N022 2769 aa8.73□□□□□ -1.01
SMPD4-213ENST00000454468 RHOHQ15669 191 aa8.72□□□□□ -1.01
SMPD4-213ENST00000454468 LRRC75A-AS1Q8N1F1 130 aa8.72□□□□□ -1.01
SMPD4-213ENST00000454468 FAM110AQ9BQ89 295 aa8.72□□□□□ -1.01
SMPD4-213ENST00000454468 NDUFA12Q9UI09 145 aa8.72□□□□□ -1.01
SMPD4-213ENST00000454468 A4D1N5 150 aa8.72□□□□□ -1.01
SMPD4-213ENST00000454468 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
SMPD4-213ENST00000454468 CCDC179H3BU77 68 aa8.71□□□□□ -1.01
SMPD4-213ENST00000454468 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
SMPD4-213ENST00000454468 RHODO00212 210 aa8.71□□□□□ -1.02
SMPD4-213ENST00000454468 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
SMPD4-213ENST00000454468 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.02
SMPD4-213ENST00000454468 TM2D2Q9BX73 214 aa8.71□□□□□ -1.02
SMPD4-213ENST00000454468 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.02
SMPD4-213ENST00000454468 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
SMPD4-213ENST00000454468 NXPH4O95158 308 aa8.7□□□□□ -1.02
SMPD4-213ENST00000454468 A0A0J9YY99 117 aa8.69□□□□□ -1.02
SMPD4-213ENST00000454468 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
SMPD4-213ENST00000454468 FSHBP01225 129 aa8.69□□□□□ -1.02
SMPD4-213ENST00000454468 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
SMPD4-213ENST00000454468 FOXI1Q12951 378 aa8.69□□□□□ -1.02
SMPD4-213ENST00000454468 LINC00482Q8N8I6 264 aa8.69□□□□□ -1.02
SMPD4-213ENST00000454468 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 MAST4O15021 2626 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 TRBV7-3A0A075B6L6 115 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 INAFM1C9JVW0 142 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 TAL2Q16559 108 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 TMEM101Q96IK0 257 aa8.68□□□□□ -1.02
SMPD4-213ENST00000454468 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
SMPD4-213ENST00000454468 PPDPFQ9H3Y8 114 aa8.67□□□□□ -1.02
SMPD4-213ENST00000454468 PRIMA1Q86XR5 153 aa8.67□□□□□ -1.02
SMPD4-213ENST00000454468 KRTAP1-3Q8IUG1 177 aa8.67□□□□□ -1.02
SMPD4-213ENST00000454468 PRO1854Q9UHT4 67 aa8.67□□□□□ -1.02
SMPD4-213ENST00000454468 C9JAW5 83 aa8.66□□□□□ -1.02
SMPD4-213ENST00000454468 LEPROTO15243 131 aa8.66□□□□□ -1.02
SMPD4-213ENST00000454468 LYRM7Q5U5X0 104 aa8.66□□□□□ -1.02
SMPD4-213ENST00000454468 LINC00694P0DN24 101 aa8.66□□□□□ -1.02
SMPD4-213ENST00000454468 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.02
SMPD4-213ENST00000454468 Q9H8V8 135 aa8.65□□□□□ -1.02
SMPD4-213ENST00000454468 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
SMPD4-213ENST00000454468 CRLF1O75462 422 aa8.65□□□□□ -1.02
SMPD4-213ENST00000454468 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
SMPD4-213ENST00000454468 K7EQD1 137 aa8.65□□□□□ -1.03
SMPD4-213ENST00000454468 IFITM1P13164 125 aa8.65□□□□□ -1.03
SMPD4-213ENST00000454468 NDUFA11Q86Y39 141 aa8.64□□□□□ -1.03
SMPD4-213ENST00000454468 LY6G6DO95868 133 aa8.64□□□□□ -1.03
SMPD4-213ENST00000454468 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
SMPD4-213ENST00000454468 CFC1P0CG37 223 aa8.64□□□□□ -1.03
SMPD4-213ENST00000454468 PPDPFLQ8WWR9 84 aa8.64□□□□□ -1.03
SMPD4-213ENST00000454468 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 C5orf38Q86SI9 138 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 TMEM86BQ8N661 226 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 RNF152Q8N8N0 203 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 CDIP1Q9H305 208 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 NOTCH1P46531 2555 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 PFN2P35080 140 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
SMPD4-213ENST00000454468 TMEM243Q9BU79 118 aa8.63□□□□□ -1.03
SMPD4-213ENST00000454468 NDUFV3P56181 108 aaKnown RBP8.62□□□□□ -1.03
SMPD4-213ENST00000454468 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
SMPD4-213ENST00000454468 Q8N2B8 174 aa8.62□□□□□ -1.03
SMPD4-213ENST00000454468 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
SMPD4-213ENST00000454468 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
SMPD4-213ENST00000454468 ZNF469Q96JG9 3925 aaPredicted RBP8.62□□□□□ -1.03
SMPD4-213ENST00000454468 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 TCL1BO95988 128 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 COX6CP09669 75 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 LINC00158P58513 81 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 COX6A2Q02221 97 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
SMPD4-213ENST00000454468 STAB1Q9NY15 2570 aa8.6□□□□□ -1.03
SMPD4-213ENST00000454468 IGLV10-54A0A075B6I4 117 aa8.6□□□□□ -1.03
SMPD4-213ENST00000454468 TRAV25A0A0B4J276 109 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms