RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 ORMDL2Q53FV1 153 aa12.87□□□□□ -0.35
NCL-205ENST00000453992 CLPSL2Q6UWE3 100 aa12.87□□□□□ -0.35
NCL-205ENST00000453992 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
NCL-205ENST00000453992 IFI27P40305 119 aaPredicted RBP12.86□□□□□ -0.35
NCL-205ENST00000453992 DGAT2L7PQ6IED9 249 aa12.85□□□□□ -0.35
NCL-205ENST00000453992 CDC42SE2Q9NRR3 84 aa12.85□□□□□ -0.35
NCL-205ENST00000453992 SPANXA1Q9NS26 97 aa12.85□□□□□ -0.35
NCL-205ENST00000453992 PKHD1P08F94 4074 aa12.84□□□□□ -0.35
NCL-205ENST00000453992 RPL39P62891 51 aaKnown RBP12.84□□□□□ -0.35
NCL-205ENST00000453992 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
NCL-205ENST00000453992 A0A087WTM6 91 aa12.83□□□□□ -0.36
NCL-205ENST00000453992 LINC01546A6NGU7 62 aa12.83□□□□□ -0.36
NCL-205ENST00000453992 EREGO14944 169 aa12.83□□□□□ -0.36
NCL-205ENST00000453992 G0S2P27469 103 aa12.83□□□□□ -0.36
NCL-205ENST00000453992 ZNF664Q8N3J9 261 aa12.83□□□□□ -0.36
NCL-205ENST00000453992 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
NCL-205ENST00000453992 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
NCL-205ENST00000453992 COLCA2A8K830 154 aa12.81□□□□□ -0.36
NCL-205ENST00000453992 C18orf32Q8TCD1 76 aa12.81□□□□□ -0.36
NCL-205ENST00000453992 PYGO1Q9Y3Y4 419 aa12.81□□□□□ -0.36
NCL-205ENST00000453992 S100A1P23297 94 aa12.8□□□□□ -0.36
NCL-205ENST00000453992 MRPS36P82909 103 aaKnown RBP12.8□□□□□ -0.36
NCL-205ENST00000453992 KRTAP26-1Q6PEX3 210 aa12.8□□□□□ -0.36
NCL-205ENST00000453992 C2orf66Q6UXQ4 117 aa12.8□□□□□ -0.36
NCL-205ENST00000453992 FA2HQ7L5A8 372 aa12.8□□□□□ -0.36
NCL-205ENST00000453992 IGLV10-54A0A075B6I4 117 aa12.79□□□□□ -0.36
NCL-205ENST00000453992 SCO1O75880 301 aa12.79□□□□□ -0.36
NCL-205ENST00000453992 Q6ZUT4 128 aa12.79□□□□□ -0.36
NCL-205ENST00000453992 MAPKAPK5-AS1Q8N8E1 139 aa12.79□□□□□ -0.36
NCL-205ENST00000453992 DNAH5Q8TE73 4624 aa12.78□□□□□ -0.36
NCL-205ENST00000453992 IGKV3OR2-268A0A0C4DH90 116 aa12.78□□□□□ -0.36
NCL-205ENST00000453992 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
NCL-205ENST00000453992 NPSP0C0P6 89 aa12.78□□□□□ -0.36
NCL-205ENST00000453992 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
NCL-205ENST00000453992 CCL25O15444 150 aa12.77□□□□□ -0.37
NCL-205ENST00000453992 ATP6V1G1O75348 118 aa12.77□□□□□ -0.37
NCL-205ENST00000453992 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
NCL-205ENST00000453992 DYNC1H1Q14204 4646 aaKnown RBP12.76□□□□□ -0.37
NCL-205ENST00000453992 TRGC2P03986 189 aa12.76□□□□□ -0.37
NCL-205ENST00000453992 RAB5BP61020 215 aa12.76□□□□□ -0.37
NCL-205ENST00000453992 Q8N814 137 aa12.76□□□□□ -0.37
NCL-205ENST00000453992 BAALCQ8WXS3 180 aa12.76□□□□□ -0.37
NCL-205ENST00000453992 CHCHD10Q8WYQ3 142 aaPredicted RBP12.76□□□□□ -0.37
NCL-205ENST00000453992 FAM104AQ969W3 186 aa12.76□□□□□ -0.37
NCL-205ENST00000453992 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
NCL-205ENST00000453992 SS18Q15532 418 aa12.75□□□□□ -0.37
NCL-205ENST00000453992 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
NCL-205ENST00000453992 IGLV4-3A0A075B6K6 122 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 LINC00614P0C842 121 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 WFDC2Q14508 124 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 RNASE13Q5GAN3 156 aaKnown RBP12.74□□□□□ -0.37
NCL-205ENST00000453992 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 URB1-AS1Q96HZ7 61 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 TMEM141Q96I45 108 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
NCL-205ENST00000453992 IGIPA6NJ69 53 aa12.73□□□□□ -0.37
NCL-205ENST00000453992 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
NCL-205ENST00000453992 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
NCL-205ENST00000453992 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
NCL-205ENST00000453992 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
NCL-205ENST00000453992 LECT2O14960 151 aa12.72□□□□□ -0.37
NCL-205ENST00000453992 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
NCL-205ENST00000453992 Q6ZN92 141 aa12.72□□□□□ -0.37
NCL-205ENST00000453992 OPRPNQ99935 248 aaPredicted RBP12.72□□□□□ -0.37
NCL-205ENST00000453992 KRTAP17-1Q9BYP8 105 aa12.72□□□□□ -0.37
NCL-205ENST00000453992 PGPEP1Q9NXJ5 209 aa12.72□□□□□ -0.37
NCL-205ENST00000453992 USP17L23D6RBM5 183 aa12.71□□□□□ -0.37
NCL-205ENST00000453992 XCL1P47992 114 aa12.71□□□□□ -0.37
NCL-205ENST00000453992 KRTAP10-2P60368 255 aa12.71□□□□□ -0.37
NCL-205ENST00000453992 CD164L2Q6UWJ8 174 aa12.71□□□□□ -0.37
NCL-205ENST00000453992 ERASQ7Z444 233 aa12.71□□□□□ -0.37
NCL-205ENST00000453992 TRAV13-1A0A0B4J241 112 aa12.7□□□□□ -0.38
NCL-205ENST00000453992 IFITM10A6NMD0 228 aa12.7□□□□□ -0.38
NCL-205ENST00000453992 FOXI1Q12951 378 aa12.7□□□□□ -0.38
NCL-205ENST00000453992 TEX43Q6ZNM6 134 aa12.7□□□□□ -0.38
NCL-205ENST00000453992 CHCHD1Q96BP2 118 aaKnown RBP12.7□□□□□ -0.38
NCL-205ENST00000453992 SCGB3A1Q96QR1 104 aa12.69□□□□□ -0.38
NCL-205ENST00000453992 AMELXQ99217 191 aa12.69□□□□□ -0.38
NCL-205ENST00000453992 C2orf88Q9BSF0 95 aa12.69□□□□□ -0.38
NCL-205ENST00000453992 LRP1BQ9NZR2 4599 aa12.68□□□□□ -0.38
NCL-205ENST00000453992 A0A096LNJ9 63 aa12.68□□□□□ -0.38
NCL-205ENST00000453992 HBDP02042 147 aa12.68□□□□□ -0.38
NCL-205ENST00000453992 VCX2Q9H322 139 aa12.68□□□□□ -0.38
NCL-205ENST00000453992 CFAP161Q6P656 301 aa12.67□□□□□ -0.38
NCL-205ENST00000453992 BAGE3Q86Y29 109 aa12.67□□□□□ -0.38
NCL-205ENST00000453992 C16orf90A8MZG2 172 aa12.66□□□□□ -0.38
NCL-205ENST00000453992 LINC00173Q6ZV60 143 aa12.66□□□□□ -0.38
NCL-205ENST00000453992 IGLV5-52A0A0A0MRZ9 124 aa12.65□□□□□ -0.38
NCL-205ENST00000453992 UBE2D1P51668 147 aa12.64□□□□□ -0.39
NCL-205ENST00000453992 C15orf56Q8N910 161 aa12.64□□□□□ -0.39
NCL-205ENST00000453992 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.63□□□□□ -0.39
NCL-205ENST00000453992 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.63□□□□□ -0.39
NCL-205ENST00000453992 COX7A2LO14548 114 aa12.63□□□□□ -0.39
NCL-205ENST00000453992 PRSS1P07477 247 aa12.63□□□□□ -0.39
NCL-205ENST00000453992 PMCHL1Q16048 86 aa12.63□□□□□ -0.39
NCL-205ENST00000453992 PDZD11Q5EBL8 140 aa12.63□□□□□ -0.39
NCL-205ENST00000453992 FAM19A3Q7Z5A8 133 aa12.63□□□□□ -0.39
NCL-205ENST00000453992 IGHV1-58A0A0C4DH39 117 aa12.62□□□□□ -0.39
NCL-205ENST00000453992 HSBP1O75506 76 aa12.62□□□□□ -0.39
NCL-205ENST00000453992 LINC00242Q5T6M2 205 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms