RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CRPP02741 224 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 IGHV3-30-3P0DP02 117 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 IGHV3-30-5P0DP03 117 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 ESDP10768 282 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 RAB5AP20339 215 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 FABP9Q0Z7S8 132 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 AMMECR1LQ6DCA0 310 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 ATRAIDQ6UW56 229 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 YPEL4Q96NS1 127 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 TM2D2Q9BX73 214 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 TRAPPC1Q9Y5R8 145 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 DNAH2Q9P225 4427 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 LINC01549A6NIU2 74 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 S100A1P23297 94 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 RBX1P62877 108 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 GAGE6Q13070 117 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 MIAQ16674 131 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 MPV17L2Q567V2 206 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 MRPL52Q86TS9 123 aaKnown RBP5.87□□□□□ -1.47
COL28A1-205ENST00000453441 Q8N8P6 123 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 CSDC2Q9Y534 153 aaKnown RBP5.87□□□□□ -1.47
COL28A1-205ENST00000453441 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
COL28A1-205ENST00000453441 ANGP03950 147 aaKnown RBP5.86□□□□□ -1.47
COL28A1-205ENST00000453441 FGF6P10767 208 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 CBLN2Q8IUK8 224 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 C20orf203Q8NBC4 194 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 ALKBH7Q9BT30 221 aaPredicted RBP5.86□□□□□ -1.47
COL28A1-205ENST00000453441 TIMM21Q9BVV7 248 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 PRR34Q9NV39 138 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
COL28A1-205ENST00000453441 FRAS1Q86XX4 4008 aa5.85□□□□□ -1.47
COL28A1-205ENST00000453441 TRAV8-4A0A0B4J246 113 aa5.85□□□□□ -1.47
COL28A1-205ENST00000453441 RTL8CO15255 209 aa5.85□□□□□ -1.47
COL28A1-205ENST00000453441 DGAT2L7PQ6IED9 249 aa5.85□□□□□ -1.47
COL28A1-205ENST00000453441 RNASEKQ6P5S7 137 aaKnown RBP5.85□□□□□ -1.47
COL28A1-205ENST00000453441 OR5A1Q8NGJ0 315 aa5.85□□□□□ -1.47
COL28A1-205ENST00000453441 SPANXA1Q9NS26 97 aa5.85□□□□□ -1.47
COL28A1-205ENST00000453441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.84□□□□□ -1.47
COL28A1-205ENST00000453441 LOC389332A0A1B0GUA5 103 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 IGKV2-29A2NJV5 120 aaPredicted RBP5.84□□□□□ -1.47
COL28A1-205ENST00000453441 CCL25O15444 150 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 PSCAO43653 123 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 NPSP0C0P6 89 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 RAB5BP61020 215 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 KIAA1644Q3SXP7 199 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 Q6ZRN7 208 aaPredicted RBP5.84□□□□□ -1.47
COL28A1-205ENST00000453441 Q8N976 141 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
COL28A1-205ENST00000453441 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 LINC01546A6NGU7 62 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 PRSS29PA6NIE9 313 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 IFI27P40305 119 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-205ENST00000453441 REG3AQ06141 175 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 LINC00269Q8N2A0 174 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 C1orf43Q9BWL3 253 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 Q9HAA7 133 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 CYSLTR1Q9Y271 337 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 UBE2D4Q9Y2X8 147 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 PYGO1Q9Y3Y4 419 aa5.83□□□□□ -1.48
COL28A1-205ENST00000453441 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 IGKV2D-24A0A075B6R9 120 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 COLCA2A8K830 154 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 MRPS36P82909 103 aaKnown RBP5.82□□□□□ -1.48
COL28A1-205ENST00000453441 PAPPA-AS1Q5QFB9 102 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 FA2HQ7L5A8 372 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 Q8N1X5 172 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 ZNF664Q8N3J9 261 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 DEFB104AQ8WTQ1 72 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 CDC42SE2Q9NRR3 84 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 FAT2Q9NYQ8 4349 aa5.82□□□□□ -1.48
COL28A1-205ENST00000453441 ATP6V1G1O75348 118 aa5.81□□□□□ -1.48
COL28A1-205ENST00000453441 C2orf66Q6UXQ4 117 aa5.81□□□□□ -1.48
COL28A1-205ENST00000453441 C18orf32Q8TCD1 76 aa5.81□□□□□ -1.48
COL28A1-205ENST00000453441 SS18Q15532 418 aa5.8□□□□□ -1.48
COL28A1-205ENST00000453441 C14orf177Q52M58 125 aa5.8□□□□□ -1.48
COL28A1-205ENST00000453441 Q6ZN92 141 aa5.8□□□□□ -1.48
COL28A1-205ENST00000453441 TIMM17AQ99595 171 aa5.8□□□□□ -1.48
COL28A1-205ENST00000453441 A0A087WTM6 91 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 C1orf196B1AJZ1 125 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 TRGC2P03986 189 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 LINC00614P0C842 121 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
COL28A1-205ENST00000453441 TOMM6Q96B49 74 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 CHCHD1Q96BP2 118 aaKnown RBP5.79□□□□□ -1.48
COL28A1-205ENST00000453441 TMEM141Q96I45 108 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 C2orf88Q9BSF0 95 aa5.79□□□□□ -1.48
COL28A1-205ENST00000453441 LINC00959A0A1B0GUT2 108 aa5.78□□□□□ -1.48
COL28A1-205ENST00000453441 CFAP161Q6P656 301 aa5.78□□□□□ -1.48
COL28A1-205ENST00000453441 CLPSL2Q6UWE3 100 aa5.78□□□□□ -1.48
COL28A1-205ENST00000453441 ERASQ7Z444 233 aa5.78□□□□□ -1.48
COL28A1-205ENST00000453441 NTN5Q8WTR8 489 aaPredicted RBP5.78□□□□□ -1.48
COL28A1-205ENST00000453441 HECTD4Q9Y4D8 3996 aa5.77□□□□□ -1.49
COL28A1-205ENST00000453441 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
COL28A1-205ENST00000453441 A0A1B0GVY2 172 aa5.77□□□□□ -1.49
COL28A1-205ENST00000453441 LRCOL1A6NCL2 159 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms