RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ARFGEF2Q9Y6D5 1785 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 EHBP1L1Q8N3D4 1523 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 FXYD1O00168 92 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 KRTAP10-3P60369 221 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 SMIM5Q71RC9 77 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 Q86TA4 180 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 TMEM14CQ9P0S9 112 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 LAMA4Q16363 1823 aa2.44□□□□□ -2.02
HMGB3P21-201ENST00000452483 LRRC37A3O60309 1634 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 SIP14410 1827 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 IGLV3-32A0A0A0MS00 114 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 C10orf142B7Z368 130 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 D6R8Y8 96 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 ARMS2P0C7Q2 107 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 COX8AP10176 69 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 MUSTN1Q8IVN3 82 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 PPP1R1CQ8WVI7 109 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 PRR15LQ9BU68 103 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 TIAM1Q13009 1591 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 GBF1Q92538 1859 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 DOCK11Q5JSL3 2073 aa2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 ZFHX2Q9C0A1 2572 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P21-201ENST00000452483 RGPD1P0DJD0 1748 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 BTAF1O14981 1849 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 PI4KAP42356 2102 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 MRC1P22897 1456 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 IGKV2-24A0A0C4DH68 120 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 F8VRH5 84 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 IGKV1-17P01599 117 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 GCHFRP30047 84 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 AMELXQ99217 191 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 UNC13CQ8NB66 2214 aa2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 URB2Q14146 1524 aaKnown RBP2.42□□□□□ -2.02
HMGB3P21-201ENST00000452483 MYOM1P52179 1685 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 CTTNBP2Q8WZ74 1663 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 SPTBP11277 2137 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 TRGV4A0A0C4DH28 118 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 IGKV3D-7A0A0C4DH55 119 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 IGKV3OR2-268A0A0C4DH90 116 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 RNASE3P12724 160 aaKnown RBP2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 LINC00315P59091 139 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 RPL37AP61513 92 aaKnown RBP2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 PRR9Q5T870 116 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 Q6JHZ5 121 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 HILPDAQ9Y5L2 63 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 V9GYV3 84 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 ABCA9Q8IUA7 1624 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 ASXL1Q8IXJ9 1541 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 DLEC1Q9Y238 1755 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 CR1P17927 2039 aa2.41□□□□□ -2.02
HMGB3P21-201ENST00000452483 ARFGEF1Q9Y6D6 1849 aa2.4□□□□□ -2.02
HMGB3P21-201ENST00000452483 COL5A3P25940 1745 aaPredicted RBP2.4□□□□□ -2.02
HMGB3P21-201ENST00000452483 ITSN1Q15811 1721 aa2.4□□□□□ -2.02
HMGB3P21-201ENST00000452483 BAZ2BQ9UIF8 2168 aaKnown RBP2.4□□□□□ -2.03
HMGB3P21-201ENST00000452483 PLXNC1O60486 1568 aa2.4□□□□□ -2.03
HMGB3P21-201ENST00000452483 MED12Q93074 2177 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 CTXND1A0A1B0GTU2 59 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 H3BVH4 76 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 M0R3E3 92 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 IL9P15248 144 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 CCL18P55774 89 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 KRTAP13-2Q52LG2 175 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 TTTY12Q9BZ98 90 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 PROK2Q9HC23 129 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 GNG13Q9P2W3 67 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 SPAG17Q6Q759 2223 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 ARHGEF5Q12774 1597 aa2.39□□□□□ -2.03
HMGB3P21-201ENST00000452483 RREB1Q92766 1687 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 MAP2P11137 1827 aaKnown RBP2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 IGKV2-40A0A087WW87 121 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 TRBV6-5A0A0K0K1A5 114 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 IGKV2-29A2NJV5 120 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 M0R135 149 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 IGKV2D-40P01614 121 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 IGLV3-19P01714 112 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 KRTAP1-4P0C5Y4 121 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 C3orf79P0CE67 100 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 IFI27P40305 119 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 FXYD3Q14802 87 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 ATP5EP2Q5VTU8 51 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 LINC00322Q6ZN03 302 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 BAGE2Q86Y30 109 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 FDCSPQ8NFU4 85 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 RAPGEF6Q8TEU7 1601 aa2.38□□□□□ -2.03
HMGB3P21-201ENST00000452483 BRWD1Q9NSI6 2320 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 ARFGEF3Q5TH69 2177 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 GPR179Q6PRD1 2367 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 UQCR11O14957 56 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 DEFB132Q7Z7B7 95 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 COA5Q86WW8 74 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 ZNF563Q8TA94 476 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 TXNDC17Q9BRA2 123 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 ATRXP46100 2492 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 C1orf167Q5SNV9 1468 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 SCN7AQ01118 1682 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 COL4A2P08572 1712 aa2.37□□□□□ -2.03
HMGB3P21-201ENST00000452483 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
HMGB3P21-201ENST00000452483 FXYD4P59646 89 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms