RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 NDUFA4L2Q9NRX3 87 aa0.72□□□□□ -2.29
PMS1-218ENST00000452382 GAPVD1Q14C86 1478 aa0.72□□□□□ -2.29
PMS1-218ENST00000452382 RAPGEF2Q9Y4G8 1499 aa0.72□□□□□ -2.29
PMS1-218ENST00000452382 TET3O43151 1660 aa0.72□□□□□ -2.29
PMS1-218ENST00000452382 TOPAZ1Q8N9V7 1692 aa0.72□□□□□ -2.29
PMS1-218ENST00000452382 ANKRD36BQ8N2N9 1353 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 TRAV22A0A0B4J277 110 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 A0A1B0GWA3 101 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 IGLC7A0M8Q6 106 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 CLPSL1A2RUU4 121 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 ZNF815PA8K554 130 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 LY6G6CO95867 125 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 CYB5AP00167 134 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 GCHFRP30047 84 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 CCL18P55774 89 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 PEA15Q15121 130 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 CFAP126Q5VTH2 177 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 C9orf62Q8N4C0 152 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 SERP2Q8N6R1 65 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 PLAC4Q8WY50 150 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 FAM167A-AS1Q96KT0 104 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 TRGV9Q99603 122 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 CACFD1Q9UGQ2 172 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 MYH4Q9Y623 1939 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 MYO7BQ6PIF6 2116 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 TOP2BQ02880 1626 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 SCRIBQ14160 1630 aa0.71□□□□□ -2.3
PMS1-218ENST00000452382 RGPD3A6NKT7 1758 aaPredicted RBP0.7□□□□□ -2.3
PMS1-218ENST00000452382 CHD1O14646 1710 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 KIAA1551Q9HCM1 1747 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 MRC1P22897 1456 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 CCDC18Q5T9S5 1454 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 TMEM14DPA8MWL7 114 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 M0R3E3 92 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 UQCR11O14957 56 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 PYY3Q5JQD4 70 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 PSMG4Q5JS54 123 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 C10orf99Q6UWK7 81 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 ZNF720Q7Z2F6 126 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 VMO1Q7Z5L0 202 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 FDCSPQ8NFU4 85 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 SMIM11BQ8TCY0 68 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 S100A16Q96FQ6 103 aaKnown RBP0.7□□□□□ -2.3
PMS1-218ENST00000452382 WFDC6Q9BQY6 131 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 BPESC1Q9GZL8 116 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 BTAF1O14981 1849 aa0.7□□□□□ -2.3
PMS1-218ENST00000452382 SUPT6HQ7KZ85 1726 aaKnown RBP0.69□□□□□ -2.3
PMS1-218ENST00000452382 MARF1Q9Y4F3 1742 aaKnown RBP0.69□□□□□ -2.3
PMS1-218ENST00000452382 SBF2Q86WG5 1849 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 MAGI1Q96QZ7 1491 aaPredicted RBP0.69□□□□□ -2.3
PMS1-218ENST00000452382 MLH3Q9UHC1 1453 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 A0A087WTM6 91 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 SYS1-DBNDD2H3BUS1 97 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 MGPP08493 103 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 SAA2P0DJI9 122 aaPredicted RBP0.69□□□□□ -2.3
PMS1-218ENST00000452382 S100A3P33764 101 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 UBE2D3P61077 147 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 UBE2D2P62837 147 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 HAMPP81172 84 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 COX17Q14061 63 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 C6orf52Q5T4I8 152 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 Q5VV11 94 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 FAM223AQ8IWN6 122 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 Q96NJ1 140 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 AMELXQ99217 191 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 S100A13Q99584 98 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 PRR15LQ9BU68 103 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 LAMC3Q9Y6N6 1575 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 IFT172Q9UG01 1749 aa0.69□□□□□ -2.3
PMS1-218ENST00000452382 CLTCQ00610 1675 aaKnown RBP0.69□□□□□ -2.3
PMS1-218ENST00000452382 ZNF236Q9UL36 1845 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
PMS1-218ENST00000452382 ADGRL2O95490 1459 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 SHANK2Q9UPX8 1470 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 CADP27708 2225 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 TRBV7-7A0A0K0K1E9 115 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 C7orf77A4D0Y5 90 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 FAM223BA6NKX1 122 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 K7EP34 96 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 ZNF137PP52743 207 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 ETDBQ3ZM63 59 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 Q6ZRX8 168 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 CNTRLQ7Z7A1 2325 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 C20orf78Q9BR46 151 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 CDC42SE2Q9NRR3 84 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 LINC01558Q9Y6Z2 57 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 MAP2P11137 1827 aaKnown RBP0.68□□□□□ -2.3
PMS1-218ENST00000452382 LAMA4Q16363 1823 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
PMS1-218ENST00000452382 SIPA1L3O60292 1781 aaPredicted RBP0.68□□□□□ -2.3
PMS1-218ENST00000452382 PXDNQ92626 1479 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 MON2Q7Z3U7 1717 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 ZNF469Q96JG9 3925 aaPredicted RBP0.67□□□□□ -2.3
PMS1-218ENST00000452382 TROQ12816 1431 aaPredicted RBP0.67□□□□□ -2.3
PMS1-218ENST00000452382 EDC4Q6P2E9 1401 aaKnown RBP0.67□□□□□ -2.3
PMS1-218ENST00000452382 UACAQ9BZF9 1416 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 DNAJC13O75165 2243 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 TRBV25-1A0A075B6N4 114 aa0.67□□□□□ -2.3
PMS1-218ENST00000452382 LEPROTL1O95214 131 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms