RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PYGO1Q9Y3Y4 419 aa8.85□□□□□ -0.99
VPS33A-202ENST00000451053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
VPS33A-202ENST00000451053 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
VPS33A-202ENST00000451053 IGHV3-30P01768 117 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 IGHV3-33P01772 117 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 IGHV3-30-3P0DP02 117 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 IGHV3-30-5P0DP03 117 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 LINC01556Q5JQF7 62 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 MRPL52Q86TS9 123 aaKnown RBP8.84□□□□□ -0.99
VPS33A-202ENST00000451053 IFI27L1Q96BM0 104 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 TMEM101Q96IK0 257 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
VPS33A-202ENST00000451053 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
VPS33A-202ENST00000451053 DNAH6Q9C0G6 4158 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 IGIPA6NJ69 53 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 IFITM10A6NMD0 228 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 FGF6P10767 208 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 Q6ZN92 141 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
VPS33A-202ENST00000451053 TMEM262E9PQX1 116 aa8.82□□□□□ -1
VPS33A-202ENST00000451053 GAGE6Q13070 117 aa8.82□□□□□ -1
VPS33A-202ENST00000451053 TTC32Q5I0X7 151 aa8.82□□□□□ -1
VPS33A-202ENST00000451053 KMT2AQ03164 3969 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 A0A087WX48 190 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 A0A1B0GUV1 79 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 KRTDAPP60985 99 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
VPS33A-202ENST00000451053 MPV17L2Q567V2 206 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 OR10D4PQ8NGN7 298 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 RYR3Q15413 4870 aa8.81□□□□□ -1
VPS33A-202ENST00000451053 C20orf202A1L168 122 aa8.8□□□□□ -1
VPS33A-202ENST00000451053 PRSS1P07477 247 aa8.8□□□□□ -1
VPS33A-202ENST00000451053 PET117Q6UWS5 81 aa8.8□□□□□ -1
VPS33A-202ENST00000451053 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
VPS33A-202ENST00000451053 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 TRAV9-2A0A087WT02 112 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 SYS1-DBNDD2H3BUS1 97 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 C3orf79P0CE67 100 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 AKR1D1P51857 326 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 RBX1P62877 108 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 PMVKQ15126 192 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 TEX43Q6ZNM6 134 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 SPATA12Q7Z6I5 190 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 C10orf126Q8N4M7 172 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 Q8N976 141 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 BAALCQ8WXS3 180 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 C2orf88Q9BSF0 95 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 VCX2Q9H322 139 aa8.79□□□□□ -1
VPS33A-202ENST00000451053 TRAV12-1A0A0B4J245 112 aa8.78□□□□□ -1
VPS33A-202ENST00000451053 LOC105371267A0A1B0GV96 52 aa8.78□□□□□ -1
VPS33A-202ENST00000451053 K7EP13 123 aa8.78□□□□□ -1
VPS33A-202ENST00000451053 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
VPS33A-202ENST00000451053 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
VPS33A-202ENST00000451053 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
VPS33A-202ENST00000451053 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
VPS33A-202ENST00000451053 Q6ZUT4 128 aa8.77□□□□□ -1.01
VPS33A-202ENST00000451053 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
VPS33A-202ENST00000451053 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
VPS33A-202ENST00000451053 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
VPS33A-202ENST00000451053 H0Y8G0 127 aa8.76□□□□□ -1.01
VPS33A-202ENST00000451053 RTL8CO15255 209 aa8.76□□□□□ -1.01
VPS33A-202ENST00000451053 AMELXQ99217 191 aa8.76□□□□□ -1.01
VPS33A-202ENST00000451053 ANGP03950 147 aaKnown RBP8.75□□□□□ -1.01
VPS33A-202ENST00000451053 LINC01545Q5VT33 79 aa8.75□□□□□ -1.01
VPS33A-202ENST00000451053 OPRPNQ99935 248 aaPredicted RBP8.75□□□□□ -1.01
VPS33A-202ENST00000451053 CST9LQ9H4G1 147 aa8.75□□□□□ -1.01
VPS33A-202ENST00000451053 Q9HAA7 133 aa8.75□□□□□ -1.01
VPS33A-202ENST00000451053 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
VPS33A-202ENST00000451053 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
VPS33A-202ENST00000451053 F8VRH5 84 aa8.74□□□□□ -1.01
VPS33A-202ENST00000451053 SCGB1D1O95968 90 aa8.74□□□□□ -1.01
VPS33A-202ENST00000451053 JOSD1Q15040 202 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-202ENST00000451053 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
VPS33A-202ENST00000451053 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
VPS33A-202ENST00000451053 UBE2WQ96B02 151 aa8.74□□□□□ -1.01
VPS33A-202ENST00000451053 CCL25O15444 150 aa8.73□□□□□ -1.01
VPS33A-202ENST00000451053 PLNP26678 52 aa8.73□□□□□ -1.01
VPS33A-202ENST00000451053 SEC11AP67812 179 aa8.73□□□□□ -1.01
VPS33A-202ENST00000451053 ODF1Q14990 250 aa8.73□□□□□ -1.01
VPS33A-202ENST00000451053 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
VPS33A-202ENST00000451053 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
VPS33A-202ENST00000451053 Q6ZRN7 208 aaPredicted RBP8.73□□□□□ -1.01
VPS33A-202ENST00000451053 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
VPS33A-202ENST00000451053 DPM2O94777 84 aa8.72□□□□□ -1.01
VPS33A-202ENST00000451053 CRPP02741 224 aa8.72□□□□□ -1.01
VPS33A-202ENST00000451053 PRR34Q9NV39 138 aa8.72□□□□□ -1.01
VPS33A-202ENST00000451053 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.02
VPS33A-202ENST00000451053 UBE2D1P51668 147 aa8.71□□□□□ -1.02
VPS33A-202ENST00000451053 REG3AQ06141 175 aa8.71□□□□□ -1.02
VPS33A-202ENST00000451053 SS18Q15532 418 aa8.71□□□□□ -1.02
VPS33A-202ENST00000451053 NFE4Q86UQ8 179 aa8.71□□□□□ -1.02
VPS33A-202ENST00000451053 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
VPS33A-202ENST00000451053 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
VPS33A-202ENST00000451053 IGKCP01834 107 aa8.7□□□□□ -1.02
VPS33A-202ENST00000451053 SMIM6P0DI80 62 aa8.7□□□□□ -1.02
VPS33A-202ENST00000451053 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
VPS33A-202ENST00000451053 HERVK_113P63121 156 aa8.7□□□□□ -1.02
VPS33A-202ENST00000451053 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms