RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TIRAPP58753 221 aa9.91□□□□□ -0.82
SYNGAP1-204ENST00000449372 RNASE3P12724 160 aaKnown RBP9.91□□□□□ -0.82
SYNGAP1-204ENST00000449372 ZNF843Q8N446 348 aa9.91□□□□□ -0.82
SYNGAP1-204ENST00000449372 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
SYNGAP1-204ENST00000449372 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
SYNGAP1-204ENST00000449372 KLLNB2CW77 178 aa9.9□□□□□ -0.82
SYNGAP1-204ENST00000449372 SOCS3O14543 225 aa9.9□□□□□ -0.82
SYNGAP1-204ENST00000449372 SYNJ2BPP57105 145 aa9.9□□□□□ -0.82
SYNGAP1-204ENST00000449372 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
SYNGAP1-204ENST00000449372 MIAQ16674 131 aa9.9□□□□□ -0.82
SYNGAP1-204ENST00000449372 BRD3OSQ6XYD6 125 aa9.9□□□□□ -0.82
SYNGAP1-204ENST00000449372 PRRC2AP48634 2157 aaKnown RBP9.9□□□□□ -0.83
SYNGAP1-204ENST00000449372 IGHV1OR15-1A0A075B7D0 117 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 IGHG2P01859 326 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 DAND5Q8N907 189 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 AVPP01185 164 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 MSMBP08118 114 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 A0A087WWL8 130 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 IGHV3-11P01762 117 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 BAALC-AS2P0C853 105 aa9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 ZNF469Q96JG9 3925 aaPredicted RBP9.89□□□□□ -0.83
SYNGAP1-204ENST00000449372 CD28P10747 220 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 NBPF19A0A087WUL8 3843 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 IGKV3D-7A0A0C4DH55 119 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 A6NDX4 124 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 WFDC11Q8NEX6 87 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
SYNGAP1-204ENST00000449372 INAFM2P0DMQ5 153 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 NDUFA12Q9UI09 145 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 A0A087WVE0 104 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 UNQ9165/PRO28630Q6UXU0 137 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 DSCR9P59020 149 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
SYNGAP1-204ENST00000449372 MAP1AP78559 2803 aaPredicted RBP9.86□□□□□ -0.83
SYNGAP1-204ENST00000449372 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
SYNGAP1-204ENST00000449372 COX7A2LO14548 114 aa9.86□□□□□ -0.83
SYNGAP1-204ENST00000449372 FHL2Q14192 279 aa9.86□□□□□ -0.83
SYNGAP1-204ENST00000449372 LY6EQ16553 131 aa9.86□□□□□ -0.83
SYNGAP1-204ENST00000449372 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
SYNGAP1-204ENST00000449372 C9orf85Q96MD7 179 aa9.85□□□□□ -0.83
SYNGAP1-204ENST00000449372 BRK1Q8WUW1 75 aa9.85□□□□□ -0.83
SYNGAP1-204ENST00000449372 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
SYNGAP1-204ENST00000449372 B4DSR2 109 aa9.85□□□□□ -0.83
SYNGAP1-204ENST00000449372 F6UB75 175 aa9.85□□□□□ -0.83
SYNGAP1-204ENST00000449372 IGHV3-16A0A0C4DH30 117 aa9.84□□□□□ -0.83
SYNGAP1-204ENST00000449372 MYO18BQ8IUG5 2567 aa9.84□□□□□ -0.83
SYNGAP1-204ENST00000449372 H3BUX3 64 aa9.84□□□□□ -0.83
SYNGAP1-204ENST00000449372 LINC00315P59091 139 aa9.84□□□□□ -0.83
SYNGAP1-204ENST00000449372 M0QY20 66 aa9.83□□□□□ -0.84
SYNGAP1-204ENST00000449372 CFHR3Q02985 330 aa9.83□□□□□ -0.84
SYNGAP1-204ENST00000449372 CR1P17927 2039 aa9.83□□□□□ -0.84
SYNGAP1-204ENST00000449372 ZFYVE26Q68DK2 2539 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 DNAL4O96015 105 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 SPTAN1Q13813 2472 aaKnown RBP9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 CACNA1BQ00975 2339 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 TIMM17BO60830 172 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 NDUFC2O95298 119 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 PIK3CD-AS1Q5SR53 167 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 ZANQ9Y493 2812 aa9.82□□□□□ -0.84
SYNGAP1-204ENST00000449372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.842e-16■■■□□ 15.2
SYNGAP1-204ENST00000449372 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
SYNGAP1-204ENST00000449372 A8MZ25 164 aa9.81□□□□□ -0.84
SYNGAP1-204ENST00000449372 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
SYNGAP1-204ENST00000449372 FSHBP01225 129 aa9.81□□□□□ -0.84
SYNGAP1-204ENST00000449372 IGLV1-40P01703 118 aa9.81□□□□□ -0.84
SYNGAP1-204ENST00000449372 TMEM243Q9BU79 118 aa9.81□□□□□ -0.84
SYNGAP1-204ENST00000449372 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 KRTAP10-9P60411 292 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 BLCAPP62952 87 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 Q6JHZ5 121 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 TRBV12-3P01733 135 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 BEAN1Q3B7T3 259 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 LINC01356Q8N9X3 169 aa9.8□□□□□ -0.84
SYNGAP1-204ENST00000449372 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
SYNGAP1-204ENST00000449372 CENPEQ02224 2701 aa9.79□□□□□ -0.84
SYNGAP1-204ENST00000449372 AKAP9Q99996 3911 aa9.79□□□□□ -0.84
SYNGAP1-204ENST00000449372 MXRA5Q9NR99 2828 aa9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 TRAV12-2A0A075B6T6 113 aa9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 MUC4Q99102 2169 aa9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 PRIMA1Q86XR5 153 aa9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 ANKRD17O75179 2603 aaKnown RBP9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 IGKV3-20P01619 116 aa9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
SYNGAP1-204ENST00000449372 Q8N2B8 174 aa9.77□□□□□ -0.84
SYNGAP1-204ENST00000449372 VSIG2Q96IQ7 327 aa9.77□□□□□ -0.84
SYNGAP1-204ENST00000449372 Q9HAA7 133 aa9.77□□□□□ -0.84
SYNGAP1-204ENST00000449372 LINC00846Q9NV44 126 aa9.77□□□□□ -0.84
SYNGAP1-204ENST00000449372 TENM4Q6N022 2769 aa9.77□□□□□ -0.84
SYNGAP1-204ENST00000449372 SPG11Q96JI7 2443 aa9.77□□□□□ -0.84
SYNGAP1-204ENST00000449372 A0A1W2PRX2 142 aa9.77□□□□□ -0.85
SYNGAP1-204ENST00000449372 KRTAP1-3Q8IUG1 177 aa9.77□□□□□ -0.85
SYNGAP1-204ENST00000449372 K7EQG2 157 aa9.77□□□□□ -0.85
SYNGAP1-204ENST00000449372 OVOL2Q9BRP0 275 aa9.77□□□□□ -0.85
SYNGAP1-204ENST00000449372 PSMB8P28062 276 aa9.76□□□□□ -0.85
SYNGAP1-204ENST00000449372 SERP1Q9Y6X1 66 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms