RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 ANGP03950 147 aaKnown RBP9.91□□□□□ -0.82
SHANK2-210ENST00000449116 NPSP0C0P6 89 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 ERASQ7Z444 233 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
SHANK2-210ENST00000449116 SACSQ9NZJ4 4579 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 NBDYA0A0U1RRE5 68 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 LCE6AA0A183 80 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 MRPS36P82909 103 aaKnown RBP9.9□□□□□ -0.82
SHANK2-210ENST00000449116 TTC32Q5I0X7 151 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 Q6ZUT4 128 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 TMEM141Q96I45 108 aa9.9□□□□□ -0.82
SHANK2-210ENST00000449116 IGLV4-3A0A075B6K6 122 aa9.89□□□□□ -0.83
SHANK2-210ENST00000449116 LINC00269Q8N2A0 174 aa9.89□□□□□ -0.83
SHANK2-210ENST00000449116 FAM104AQ969W3 186 aa9.89□□□□□ -0.83
SHANK2-210ENST00000449116 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
SHANK2-210ENST00000449116 KMT2AQ03164 3969 aa9.89□□□□□ -0.83
SHANK2-210ENST00000449116 IBA57-AS1B1ANH7 110 aa9.88□□□□□ -0.83
SHANK2-210ENST00000449116 ATP5LO75964 103 aa9.88□□□□□ -0.83
SHANK2-210ENST00000449116 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
SHANK2-210ENST00000449116 CRPP02741 224 aa9.88□□□□□ -0.83
SHANK2-210ENST00000449116 Q6ZN92 141 aa9.88□□□□□ -0.83
SHANK2-210ENST00000449116 KRTAP1-5Q9BYS1 174 aa9.88□□□□□ -0.83
SHANK2-210ENST00000449116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
SHANK2-210ENST00000449116 REG3AQ06141 175 aa9.87□□□□□ -0.83
SHANK2-210ENST00000449116 RNASE13Q5GAN3 156 aaKnown RBP9.87□□□□□ -0.83
SHANK2-210ENST00000449116 PAPPA-AS1Q5QFB9 102 aa9.87□□□□□ -0.83
SHANK2-210ENST00000449116 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
SHANK2-210ENST00000449116 UBE2WQ96B02 151 aa9.87□□□□□ -0.83
SHANK2-210ENST00000449116 PRR34Q9NV39 138 aa9.87□□□□□ -0.83
SHANK2-210ENST00000449116 TEX43Q6ZNM6 134 aa9.86□□□□□ -0.83
SHANK2-210ENST00000449116 VCX2Q9H322 139 aa9.86□□□□□ -0.83
SHANK2-210ENST00000449116 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
SHANK2-210ENST00000449116 TMA7Q9Y2S6 64 aaKnown RBP9.86□□□□□ -0.83
SHANK2-210ENST00000449116 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 M0R2N4 97 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 SNRPEP62304 92 aaKnown RBP9.85□□□□□ -0.83
SHANK2-210ENST00000449116 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 Q6ZR54 194 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 BAALCQ8WXS3 180 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 IFI27L1Q96BM0 104 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
SHANK2-210ENST00000449116 AMELXQ99217 191 aa9.85□□□□□ -0.83
SHANK2-210ENST00000449116 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 C5orf52A6NGY3 159 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 FABP4P15090 132 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 S100A2P29034 98 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 MIAQ16674 131 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 LINC00173Q6ZV60 143 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 C2orf88Q9BSF0 95 aa9.84□□□□□ -0.83
SHANK2-210ENST00000449116 IFITM10A6NMD0 228 aa9.83□□□□□ -0.84
SHANK2-210ENST00000449116 Q9HAA7 133 aa9.83□□□□□ -0.84
SHANK2-210ENST00000449116 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
SHANK2-210ENST00000449116 TRAV13-1A0A0B4J241 112 aa9.82□□□□□ -0.84
SHANK2-210ENST00000449116 TRAV8-4A0A0B4J246 113 aa9.82□□□□□ -0.84
SHANK2-210ENST00000449116 LINC00959A0A1B0GUT2 108 aa9.82□□□□□ -0.84
SHANK2-210ENST00000449116 PMVKQ15126 192 aa9.82□□□□□ -0.84
SHANK2-210ENST00000449116 ZC2HC1BQ5TFG8 222 aa9.82□□□□□ -0.84
SHANK2-210ENST00000449116 CCL25O15444 150 aa9.81□□□□□ -0.84
SHANK2-210ENST00000449116 PRSS1P07477 247 aa9.81□□□□□ -0.84
SHANK2-210ENST00000449116 SS18Q15532 418 aa9.81□□□□□ -0.84
SHANK2-210ENST00000449116 RMI2Q96E14 147 aa9.81□□□□□ -0.84
SHANK2-210ENST00000449116 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
SHANK2-210ENST00000449116 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 UBE2D1P51668 147 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 HIST1H2BLQ99880 126 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 MAP1LC3CQ9BXW4 147 aa9.8□□□□□ -0.84
SHANK2-210ENST00000449116 DNAH2Q9P225 4427 aa9.79□□□□□ -0.84
SHANK2-210ENST00000449116 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
SHANK2-210ENST00000449116 CHCHD10Q8WYQ3 142 aaPredicted RBP9.79□□□□□ -0.84
SHANK2-210ENST00000449116 RYR2Q92736 4967 aa9.79□□□□□ -0.84
SHANK2-210ENST00000449116 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
SHANK2-210ENST00000449116 TM2D2Q9BX73 214 aa9.78□□□□□ -0.84
SHANK2-210ENST00000449116 COX11Q9Y6N1 276 aa9.78□□□□□ -0.84
SHANK2-210ENST00000449116 H0Y8G0 127 aa9.77□□□□□ -0.85
SHANK2-210ENST00000449116 XCL1P47992 114 aa9.77□□□□□ -0.85
SHANK2-210ENST00000449116 LINC00242Q5T6M2 205 aa9.77□□□□□ -0.85
SHANK2-210ENST00000449116 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
SHANK2-210ENST00000449116 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
SHANK2-210ENST00000449116 SYS1-DBNDD2H3BUS1 97 aa9.76□□□□□ -0.85
SHANK2-210ENST00000449116 SEC11AP67812 179 aa9.76□□□□□ -0.85
SHANK2-210ENST00000449116 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
SHANK2-210ENST00000449116 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
SHANK2-210ENST00000449116 CHTOPQ9Y3Y2 248 aaKnown RBP9.76□□□□□ -0.85
SHANK2-210ENST00000449116 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
SHANK2-210ENST00000449116 C3orf79P0CE67 100 aa9.75□□□□□ -0.85
SHANK2-210ENST00000449116 KRTDAPP60985 99 aa9.75□□□□□ -0.85
SHANK2-210ENST00000449116 ODF1Q14990 250 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms