RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CHCHD5Q9BSY4 110 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 FAT1Q14517 4588 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 TRBV25-1A0A075B6N4 114 aa9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 IBA57-AS1B1ANH7 110 aa9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 ESDP10768 282 aa9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 NIT1Q86X76 327 aa9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 NXT2Q9NPJ8 142 aaKnown RBP9.18□□□□□ -0.94
PDLIM2-213ENST00000448520 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 LINC00310P59036 64 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 TMEM97Q5BJF2 176 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 FA2HQ7L5A8 372 aa9.17□□□□□ -0.94
PDLIM2-213ENST00000448520 HERC1Q15751 4861 aa9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 NUPR1O60356 82 aa9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 Q0VG73 95 aa9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 PMCHL1Q16048 86 aa9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 BAGE3Q86Y29 109 aa9.16□□□□□ -0.94
PDLIM2-213ENST00000448520 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 TMEM262E9PQX1 116 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 SERF1AO75920 110 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 LAGE3Q14657 143 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 MPV17L2Q567V2 206 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 Q8N976 141 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
PDLIM2-213ENST00000448520 LINC00614P0C842 121 aa9.14□□□□□ -0.95
PDLIM2-213ENST00000448520 Q8N814 137 aa9.14□□□□□ -0.95
PDLIM2-213ENST00000448520 TM2D2Q9BX73 214 aa9.14□□□□□ -0.95
PDLIM2-213ENST00000448520 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 A0A096LNJ9 63 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 UBE2L6O14933 153 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 FGF6P10767 208 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 NDUFA6P56556 154 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 RBX1P62877 108 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
PDLIM2-213ENST00000448520 ORMDL2Q53FV1 153 aa9.12□□□□□ -0.95
PDLIM2-213ENST00000448520 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
PDLIM2-213ENST00000448520 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
PDLIM2-213ENST00000448520 OPRPNQ99935 248 aaPredicted RBP9.12□□□□□ -0.95
PDLIM2-213ENST00000448520 Q9HAA7 133 aa9.12□□□□□ -0.95
PDLIM2-213ENST00000448520 SRRM2Q9UQ35 2752 aaKnown RBP9.12□□□□□ -0.95
PDLIM2-213ENST00000448520 RAB5BP61020 215 aa9.11□□□□□ -0.95
PDLIM2-213ENST00000448520 RNASE13Q5GAN3 156 aaKnown RBP9.11□□□□□ -0.95
PDLIM2-213ENST00000448520 AMMECR1LQ6DCA0 310 aa9.11□□□□□ -0.95
PDLIM2-213ENST00000448520 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
PDLIM2-213ENST00000448520 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
PDLIM2-213ENST00000448520 A0A087WX48 190 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 TRAV8-3A0A0A6YYJ7 113 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 K7EMI3 77 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 Q6ZUT4 128 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
PDLIM2-213ENST00000448520 HSBP1O75506 76 aa9.09□□□□□ -0.95
PDLIM2-213ENST00000448520 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.95
PDLIM2-213ENST00000448520 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
PDLIM2-213ENST00000448520 H7C423 109 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 ANGP03950 147 aaKnown RBP9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 HAMPP81172 84 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 FAM30AQ9NZY2 134 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 COX11Q9Y6N1 276 aa9.08□□□□□ -0.96
PDLIM2-213ENST00000448520 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
PDLIM2-213ENST00000448520 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
PDLIM2-213ENST00000448520 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
PDLIM2-213ENST00000448520 HBDP02042 147 aa9.07□□□□□ -0.96
PDLIM2-213ENST00000448520 PLA2G1BP04054 148 aaKnown RBP9.07□□□□□ -0.96
PDLIM2-213ENST00000448520 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
PDLIM2-213ENST00000448520 IGLV4-3A0A075B6K6 122 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 J3QL48 77 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 PDZD11Q5EBL8 140 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 COA6Q5JTJ3 125 aaKnown RBP9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 DGAT2L7PQ6IED9 249 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 SCGB3A1Q96QR1 104 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
PDLIM2-213ENST00000448520 LOC105371267A0A1B0GV96 52 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 PKIAP61925 76 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 ENHOQ6UWT2 76 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 Q6ZSA8 131 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 ZNF664Q8N3J9 261 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 TMEM101Q96IK0 257 aa9.05□□□□□ -0.96
PDLIM2-213ENST00000448520 CDC42SE2Q9NRR3 84 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms