RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PIK3CD-AS1Q5SR53 167 aa11.65□□□□□ -0.54
CNOT3-204ENST00000447684 DSCR8Q96T75 97 aa11.65□□□□□ -0.54
CNOT3-204ENST00000447684 Q6ZSN1 163 aa11.64□□□□□ -0.55
CNOT3-204ENST00000447684 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
CNOT3-204ENST00000447684 C14orf132Q9NPU4 83 aa11.64□□□□□ -0.55
CNOT3-204ENST00000447684 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
CNOT3-204ENST00000447684 ATRXP46100 2492 aa11.64□□□□□ -0.55
CNOT3-204ENST00000447684 BEAN1Q3B7T3 259 aa11.63□□□□□ -0.55
CNOT3-204ENST00000447684 MALP21145 153 aa11.63□□□□□ -0.55
CNOT3-204ENST00000447684 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
CNOT3-204ENST00000447684 RPL18AQ02543 176 aaKnown RBP11.62□□□□□ -0.55
CNOT3-204ENST00000447684 H3BUA1 57 aa11.61□□□□□ -0.55
CNOT3-204ENST00000447684 H3BUX3 64 aa11.6□□□□□ -0.55
CNOT3-204ENST00000447684 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
CNOT3-204ENST00000447684 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
CNOT3-204ENST00000447684 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
CNOT3-204ENST00000447684 ZNF292O60281 2723 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 CUBNO60494 3623 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
CNOT3-204ENST00000447684 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
CNOT3-204ENST00000447684 COPS9Q8WXC6 57 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 CSPG4Q6UVK1 2322 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 DPH3Q96FX2 82 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 CRYBG3Q68DQ2 2970 aa11.59□□□□□ -0.55
CNOT3-204ENST00000447684 LMO4P61968 165 aa11.58□□□□□ -0.56
CNOT3-204ENST00000447684 HIST1H4AP62805 103 aaKnown RBP11.58□□□□□ -0.56
CNOT3-204ENST00000447684 RPS28P62857 69 aaKnown RBP11.58□□□□□ -0.56
CNOT3-204ENST00000447684 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 A0A1W2PPR1 153 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 C4orf26Q17RF5 130 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 CRPP02741 224 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 HIST2H2BCQ6DN03 193 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 HIST2H2BDQ6DRA6 164 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 LINC00846Q9NV44 126 aa11.57□□□□□ -0.56
CNOT3-204ENST00000447684 ADORA2A-AS1P86434 159 aa11.56□□□□□ -0.56
CNOT3-204ENST00000447684 LINC00242Q5T6M2 205 aa11.56□□□□□ -0.56
CNOT3-204ENST00000447684 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
CNOT3-204ENST00000447684 TMEM258P61165 79 aa11.56□□□□□ -0.56
CNOT3-204ENST00000447684 HRCT1Q6UXD1 115 aa11.56□□□□□ -0.56
CNOT3-204ENST00000447684 A0A087WYN8 130 aa11.56□□□□□ -0.56
CNOT3-204ENST00000447684 SMIM1B2RUZ4 78 aa11.55□□□□□ -0.56
CNOT3-204ENST00000447684 K7EMT4 169 aa11.55□□□□□ -0.56
CNOT3-204ENST00000447684 SPG11Q96JI7 2443 aa11.55□□□□□ -0.56
CNOT3-204ENST00000447684 K7EQG2 157 aa11.55□□□□□ -0.56
CNOT3-204ENST00000447684 OXTP01178 125 aa11.55□□□□□ -0.56
CNOT3-204ENST00000447684 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
CNOT3-204ENST00000447684 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
CNOT3-204ENST00000447684 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
CNOT3-204ENST00000447684 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
CNOT3-204ENST00000447684 PIMREGQ9BSJ6 248 aa11.54□□□□□ -0.56
CNOT3-204ENST00000447684 IGLV5-45A0A087WSX0 123 aa11.54□□□□□ -0.56
CNOT3-204ENST00000447684 NCR3O14931 201 aa11.54□□□□□ -0.56
CNOT3-204ENST00000447684 TRAV25A0A0B4J276 109 aa11.52□□□□□ -0.56
CNOT3-204ENST00000447684 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.56
CNOT3-204ENST00000447684 TRAV13-2A0A0B4J235 113 aa11.52□□□□□ -0.57
CNOT3-204ENST00000447684 SLPIP03973 132 aa11.52□□□□□ -0.57
CNOT3-204ENST00000447684 LINC01561Q8N1V8 128 aa11.52□□□□□ -0.57
CNOT3-204ENST00000447684 LINC00337Q8N6G1 96 aa11.52□□□□□ -0.57
CNOT3-204ENST00000447684 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
CNOT3-204ENST00000447684 LECT2O14960 151 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 MIR7-3HGQ8N6C7 128 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 C10orf105Q8TEF2 133 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 ABCA2Q9BZC7 2435 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 CFHR3Q02985 330 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 Q6JHZ5 121 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 K7ENP7 123 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
CNOT3-204ENST00000447684 DEFB131AP59861 70 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 SMIM11BQ8TCY0 68 aa11.5□□□□□ -0.57
CNOT3-204ENST00000447684 ZNF415Q09FC8 603 aa11.49□□□□□ -0.57
CNOT3-204ENST00000447684 UPK3BQ9BT76 320 aa11.49□□□□□ -0.57
CNOT3-204ENST00000447684 CSMD2Q7Z408 3487 aa11.49□□□□□ -0.57
CNOT3-204ENST00000447684 HILS1P60008 231 aa11.49□□□□□ -0.57
CNOT3-204ENST00000447684 A6NDX4 124 aa11.48□□□□□ -0.57
CNOT3-204ENST00000447684 F5H768 121 aa11.48□□□□□ -0.57
CNOT3-204ENST00000447684 LINC00158P58513 81 aa11.48□□□□□ -0.57
CNOT3-204ENST00000447684 IGHV3-53P01767 116 aa11.47□□□□□ -0.57
CNOT3-204ENST00000447684 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.57
CNOT3-204ENST00000447684 TRAV23DV6A0A075B6W5 121 aa11.46□□□□□ -0.57
CNOT3-204ENST00000447684 IGKV2D-28P01615 120 aa11.46□□□□□ -0.57
CNOT3-204ENST00000447684 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.58
CNOT3-204ENST00000447684 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.58
CNOT3-204ENST00000447684 FHL2Q14192 279 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 IGF2RP11717 2491 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 OVOL2Q9BRP0 275 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 WIPF1O43516 503 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 GHRHP01286 108 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 Q96MF0 132 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 PRORYQ9H606 182 aa11.45□□□□□ -0.58
CNOT3-204ENST00000447684 PF4P02776 101 aa11.44□□□□□ -0.58
CNOT3-204ENST00000447684 PFN2P35080 140 aa11.44□□□□□ -0.58
CNOT3-204ENST00000447684 Q5XG85 94 aa11.43□□□□□ -0.58
CNOT3-204ENST00000447684 RBMY1BA6NDE4 496 aaKnown RBP11.43□□□□□ -0.58
CNOT3-204ENST00000447684 RBMY1EA6NEQ0 496 aaKnown RBP11.43□□□□□ -0.58
CNOT3-204ENST00000447684 PAX4O43316 350 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms