RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 TCTAP57738 103 aa17.11■□□□□ 0.33
RFFL-206ENST00000447669 TMEM97Q5BJF2 176 aa17.11■□□□□ 0.33
RFFL-206ENST00000447669 VCX2Q9H322 139 aa17.11■□□□□ 0.33
RFFL-206ENST00000447669 CHTOPQ9Y3Y2 248 aaKnown RBP17.11■□□□□ 0.33
RFFL-206ENST00000447669 hDV102S1A0JD36 115 aa17.1■□□□□ 0.33
RFFL-206ENST00000447669 ESRGQ1W209 222 aa17.1■□□□□ 0.33
RFFL-206ENST00000447669 TRAV12-1A0A0B4J245 112 aa17.09■□□□□ 0.33
RFFL-206ENST00000447669 MPV17L2Q567V2 206 aa17.09■□□□□ 0.33
RFFL-206ENST00000447669 MRPL52Q86TS9 123 aaKnown RBP17.09■□□□□ 0.33
RFFL-206ENST00000447669 PAM16Q9Y3D7 125 aa17.09■□□□□ 0.33
RFFL-206ENST00000447669 LYSTQ99698 3801 aa17.09■□□□□ 0.33
RFFL-206ENST00000447669 SH2D6Q7Z4S9 175 aa17.08■□□□□ 0.33
RFFL-206ENST00000447669 AMELXQ99217 191 aa17.08■□□□□ 0.33
RFFL-206ENST00000447669 OR5A1Q8NGJ0 315 aa17.08■□□□□ 0.32
RFFL-206ENST00000447669 TIMM21Q9BVV7 248 aa17.08■□□□□ 0.32
RFFL-206ENST00000447669 LELP1Q5T871 98 aa17.07■□□□□ 0.32
RFFL-206ENST00000447669 CDC42SE2Q9NRR3 84 aa17.07■□□□□ 0.32
RFFL-206ENST00000447669 DNAH7Q8WXX0 4024 aa17.06■□□□□ 0.32
RFFL-206ENST00000447669 IGLV4-69A0A075B6H9 119 aa17.06■□□□□ 0.32
RFFL-206ENST00000447669 F8VRH5 84 aa17.06■□□□□ 0.32
RFFL-206ENST00000447669 STPG4Q8N801 248 aa17.06■□□□□ 0.32
RFFL-206ENST00000447669 H7C423 109 aa17.05■□□□□ 0.32
RFFL-206ENST00000447669 ZNF664Q8N3J9 261 aa17.05■□□□□ 0.32
RFFL-206ENST00000447669 IGKV3OR2-268A0A0C4DH90 116 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 A0A0J9YXV3 536 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 RBX1P62877 108 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 TMEM101Q96IK0 257 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 CSDC2Q9Y534 153 aaKnown RBP17.04■□□□□ 0.32
RFFL-206ENST00000447669 DPM2O94777 84 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 IGKCP01834 107 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 MRPS36P82909 103 aaKnown RBP17.04■□□□□ 0.32
RFFL-206ENST00000447669 VAMP8Q9BV40 100 aa17.04■□□□□ 0.32
RFFL-206ENST00000447669 C11orf86A6NJI1 115 aa17.03■□□□□ 0.32
RFFL-206ENST00000447669 WFDC10BQ8IUB3 73 aa17.03■□□□□ 0.32
RFFL-206ENST00000447669 PRO1933Q9H354 126 aa17.03■□□□□ 0.32
RFFL-206ENST00000447669 S100A12P80511 92 aa17.02■□□□□ 0.32
RFFL-206ENST00000447669 CLPSL2Q6UWE3 100 aa17.02■□□□□ 0.32
RFFL-206ENST00000447669 TRAV9-2A0A087WT02 112 aa17.01■□□□□ 0.31
RFFL-206ENST00000447669 TRAV13-1A0A0B4J241 112 aa17.01■□□□□ 0.31
RFFL-206ENST00000447669 PAPPA-AS1Q5QFB9 102 aa17.01■□□□□ 0.31
RFFL-206ENST00000447669 TENM2Q9NT68 2774 aa17.01■□□□□ 0.31
RFFL-206ENST00000447669 STARD9Q9P2P6 4700 aa17.01■□□□□ 0.31
RFFL-206ENST00000447669 SPATA45Q537H7 98 aa17■□□□□ 0.31
RFFL-206ENST00000447669 C15orf53Q8NAA6 179 aa17■□□□□ 0.31
RFFL-206ENST00000447669 ZNF25P17030 456 aaPredicted RBP16.99■□□□□ 0.31
RFFL-206ENST00000447669 NPSP0C0P6 89 aa16.99■□□□□ 0.31
RFFL-206ENST00000447669 DYNC2H1Q8NCM8 4307 aaKnown RBP16.98■□□□□ 0.31
RFFL-206ENST00000447669 IGHV3-30P01768 117 aa16.98■□□□□ 0.31
RFFL-206ENST00000447669 IGHV3-33P01772 117 aa16.98■□□□□ 0.31
RFFL-206ENST00000447669 IGHV3-30-3P0DP02 117 aa16.98■□□□□ 0.31
RFFL-206ENST00000447669 IGHV3-30-5P0DP03 117 aa16.98■□□□□ 0.31
RFFL-206ENST00000447669 UBE2D1P51668 147 aa16.98■□□□□ 0.31
RFFL-206ENST00000447669 ANKRD39Q53RE8 183 aa16.98■□□□□ 0.31
RFFL-206ENST00000447669 C2orf88Q9BSF0 95 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 A0A1B0GUV1 79 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 PLNP26678 52 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 TIRAPP58753 221 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 CHAC1Q9BUX1 264 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 TP73-AS1Q9UF72 201 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 LINC00588Q9Y4M8 146 aa16.97■□□□□ 0.31
RFFL-206ENST00000447669 PLECQ15149 4684 aaKnown RBP16.97■□□□□ 0.31
RFFL-206ENST00000447669 TRAV8-6A0A0B4J262 113 aa16.96■□□□□ 0.31
RFFL-206ENST00000447669 COX6A2Q02221 97 aa16.96■□□□□ 0.31
RFFL-206ENST00000447669 SMAGPQ0VAQ4 97 aa16.96■□□□□ 0.31
RFFL-206ENST00000447669 ANGP03950 147 aaKnown RBP16.96■□□□□ 0.3
RFFL-206ENST00000447669 LINC00269Q8N2A0 174 aa16.96■□□□□ 0.3
RFFL-206ENST00000447669 TMEM170BQ5T4T1 132 aa16.94■□□□□ 0.3
RFFL-206ENST00000447669 IGLC3P0DOY3 106 aa16.94■□□□□ 0.3
RFFL-206ENST00000447669 LINC00242Q5T6M2 205 aa16.93■□□□□ 0.3
RFFL-206ENST00000447669 ZFAND6Q6FIF0 208 aa16.93■□□□□ 0.3
RFFL-206ENST00000447669 IGKV2D-26A0A0A0MRZ7 120 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 NFE4Q86UQ8 179 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 C14orf144Q96I85 54 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 APLNQ9ULZ1 77 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 PCP4L1A6NKN8 68 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 HSBP1L1C9JCN9 74 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 KLK12Q9UKR0 248 aa16.92■□□□□ 0.3
RFFL-206ENST00000447669 ZNF22P17026 224 aaPredicted RBP16.91■□□□□ 0.3
RFFL-206ENST00000447669 IGHV3-64A0A075B6Q5 118 aa16.89■□□□□ 0.29
RFFL-206ENST00000447669 TTTY13Q9BZ97 58 aa16.89■□□□□ 0.29
RFFL-206ENST00000447669 LINC00959A0A1B0GUT2 108 aa16.89■□□□□ 0.29
RFFL-206ENST00000447669 TINCRA0A1B0GVN0 87 aa16.89■□□□□ 0.29
RFFL-206ENST00000447669 CCL18P55774 89 aa16.88■□□□□ 0.29
RFFL-206ENST00000447669 GEMIN7Q9H840 131 aaKnown RBP16.88■□□□□ 0.29
RFFL-206ENST00000447669 CDKN2A-AS1Q9UH64 79 aa16.88■□□□□ 0.29
RFFL-206ENST00000447669 IGLV10-54A0A075B6I4 117 aa16.87■□□□□ 0.29
RFFL-206ENST00000447669 NMUP48645 174 aa16.87■□□□□ 0.29
RFFL-206ENST00000447669 REG3AQ06141 175 aa16.87■□□□□ 0.29
RFFL-206ENST00000447669 LINC00469Q8N7U9 141 aa16.87■□□□□ 0.29
RFFL-206ENST00000447669 NUPR2A6NF83 97 aa16.86■□□□□ 0.29
RFFL-206ENST00000447669 PCP2Q8IVA1 136 aa16.85■□□□□ 0.29
RFFL-206ENST00000447669 MRPS16Q9Y3D3 137 aaKnown RBP16.85■□□□□ 0.29
RFFL-206ENST00000447669 TRAV8-3A0A0A6YYJ7 113 aa16.84■□□□□ 0.29
RFFL-206ENST00000447669 SPINK8P0C7L1 97 aa16.84■□□□□ 0.29
RFFL-206ENST00000447669 PKIAP61925 76 aa16.84■□□□□ 0.29
RFFL-206ENST00000447669 ENHOQ6UWT2 76 aa16.84■□□□□ 0.29
RFFL-206ENST00000447669 XCL1P47992 114 aa16.84■□□□□ 0.29
RFFL-206ENST00000447669 TMEM223A0PJW6 202 aa16.83■□□□□ 0.28
RFFL-206ENST00000447669 FAM19A3Q7Z5A8 133 aa16.83■□□□□ 0.28
RFFL-206ENST00000447669 KLK5Q9Y337 293 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms