RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
SGCE-206ENST00000445866 CDC42SE2Q9NRR3 84 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 CSDC2Q9Y534 153 aaKnown RBP11.78□□□□□ -0.52
SGCE-206ENST00000445866 DNAH1Q9P2D7 4330 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 LCE6AA0A183 80 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 K7EP13 123 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 S100A6P06703 90 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 ERASQ7Z444 233 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 C10orf126Q8N4M7 172 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 TTC32Q5I0X7 151 aa11.77□□□□□ -0.53
SGCE-206ENST00000445866 UBE2WQ96B02 151 aa11.76□□□□□ -0.53
SGCE-206ENST00000445866 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 PDZD11Q5EBL8 140 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 RNASE13Q5GAN3 156 aaKnown RBP11.75□□□□□ -0.53
SGCE-206ENST00000445866 TMEM141Q96I45 108 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
SGCE-206ENST00000445866 CLPSL2Q6UWE3 100 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 Q6ZUT4 128 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 KRTAP1-5Q9BYS1 174 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 VCX2Q9H322 139 aa11.75□□□□□ -0.53
SGCE-206ENST00000445866 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
SGCE-206ENST00000445866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
SGCE-206ENST00000445866 FABP4P15090 132 aa11.74□□□□□ -0.53
SGCE-206ENST00000445866 REG3AQ06141 175 aa11.74□□□□□ -0.53
SGCE-206ENST00000445866 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
SGCE-206ENST00000445866 ATP5LO75964 103 aa11.73□□□□□ -0.53
SGCE-206ENST00000445866 CRPP02741 224 aa11.73□□□□□ -0.53
SGCE-206ENST00000445866 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
SGCE-206ENST00000445866 ENHOQ6UWT2 76 aa11.73□□□□□ -0.53
SGCE-206ENST00000445866 Q6ZN92 141 aa11.73□□□□□ -0.53
SGCE-206ENST00000445866 Q9HAA7 133 aa11.73□□□□□ -0.53
SGCE-206ENST00000445866 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
SGCE-206ENST00000445866 NPSP0C0P6 89 aa11.72□□□□□ -0.53
SGCE-206ENST00000445866 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
SGCE-206ENST00000445866 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
SGCE-206ENST00000445866 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
SGCE-206ENST00000445866 Q6ZR54 194 aa11.71□□□□□ -0.53
SGCE-206ENST00000445866 SNRPEP62304 92 aaKnown RBP11.71□□□□□ -0.54
SGCE-206ENST00000445866 TEX43Q6ZNM6 134 aa11.71□□□□□ -0.54
SGCE-206ENST00000445866 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
SGCE-206ENST00000445866 LINC00173Q6ZV60 143 aa11.7□□□□□ -0.54
SGCE-206ENST00000445866 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
SGCE-206ENST00000445866 HSPB8Q9UJY1 196 aa11.7□□□□□ -0.54
SGCE-206ENST00000445866 KMT2AQ03164 3969 aa11.7□□□□□ -0.54
SGCE-206ENST00000445866 PRSS1P07477 247 aa11.69□□□□□ -0.54
SGCE-206ENST00000445866 MIAQ16674 131 aa11.69□□□□□ -0.54
SGCE-206ENST00000445866 SACSQ9NZJ4 4579 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 LINC00959A0A1B0GUT2 108 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 IFITM10A6NMD0 228 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 AMELXQ99217 191 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 S100A2P29034 98 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 BAALCQ8WXS3 180 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 C2orf88Q9BSF0 95 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 CST9LQ9H4G1 147 aa11.68□□□□□ -0.54
SGCE-206ENST00000445866 IGKV2D-24A0A075B6R9 120 aa11.67□□□□□ -0.54
SGCE-206ENST00000445866 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
SGCE-206ENST00000445866 PRSS29PA6NIE9 313 aa11.67□□□□□ -0.54
SGCE-206ENST00000445866 PMVKQ15126 192 aa11.67□□□□□ -0.54
SGCE-206ENST00000445866 SS18Q15532 418 aa11.67□□□□□ -0.54
SGCE-206ENST00000445866 HIST3H2BBQ8N257 126 aa11.67□□□□□ -0.54
SGCE-206ENST00000445866 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
SGCE-206ENST00000445866 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
SGCE-206ENST00000445866 NFE4Q86UQ8 179 aa11.66□□□□□ -0.54
SGCE-206ENST00000445866 RMI2Q96E14 147 aa11.66□□□□□ -0.54
SGCE-206ENST00000445866 C1orf43Q9BWL3 253 aa11.66□□□□□ -0.54
SGCE-206ENST00000445866 C6orf223Q8N319 242 aa11.65□□□□□ -0.54
SGCE-206ENST00000445866 CCL25O15444 150 aa11.65□□□□□ -0.55
SGCE-206ENST00000445866 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.55
SGCE-206ENST00000445866 TM2D2Q9BX73 214 aa11.65□□□□□ -0.55
SGCE-206ENST00000445866 H0Y8G0 127 aa11.64□□□□□ -0.55
SGCE-206ENST00000445866 XCL1P47992 114 aa11.64□□□□□ -0.55
SGCE-206ENST00000445866 PACRGQ96M98 296 aaPredicted RBP11.64□□□□□ -0.55
SGCE-206ENST00000445866 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
SGCE-206ENST00000445866 KMT2CQ8NEZ4 4911 aaKnown RBP11.64□□□□□ -0.55
SGCE-206ENST00000445866 UBE2D1P51668 147 aa11.63□□□□□ -0.55
SGCE-206ENST00000445866 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
SGCE-206ENST00000445866 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
SGCE-206ENST00000445866 HIST1H2BLQ99880 126 aa11.62□□□□□ -0.55
SGCE-206ENST00000445866 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
SGCE-206ENST00000445866 PSCAO43653 123 aa11.62□□□□□ -0.55
SGCE-206ENST00000445866 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
SGCE-206ENST00000445866 DNAH6Q9C0G6 4158 aa11.6□□□□□ -0.55
SGCE-206ENST00000445866 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
SGCE-206ENST00000445866 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
SGCE-206ENST00000445866 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
SGCE-206ENST00000445866 CHTOPQ9Y3Y2 248 aaKnown RBP11.6□□□□□ -0.55
SGCE-206ENST00000445866 HYDINQ4G0P3 5121 aa11.59□□□□□ -0.55
SGCE-206ENST00000445866 KRTDAPP60985 99 aa11.59□□□□□ -0.55
SGCE-206ENST00000445866 COX6A2Q02221 97 aa11.59□□□□□ -0.55
SGCE-206ENST00000445866 KRTAP26-1Q6PEX3 210 aa11.59□□□□□ -0.55
SGCE-206ENST00000445866 GEMIN7Q9H840 131 aaKnown RBP11.59□□□□□ -0.55
SGCE-206ENST00000445866 SEC11AP67812 179 aa11.59□□□□□ -0.55
SGCE-206ENST00000445866 SYS1-DBNDD2H3BUS1 97 aa11.58□□□□□ -0.56
SGCE-206ENST00000445866 C3orf79P0CE67 100 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms