RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 SPINK8P0C7L1 97 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
CLDN9-201ENST00000445369 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
CLDN9-201ENST00000445369 NF1P21359 2839 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 ITPR2Q14571 2701 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 A0A0B4J2C4 111 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 NDUFA7O95182 113 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 TIRAPP58753 221 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 SH2D6Q7Z4S9 175 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 GEMIN7Q9H840 131 aaKnown RBP12.74□□□□□ -0.37
CLDN9-201ENST00000445369 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
CLDN9-201ENST00000445369 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
CLDN9-201ENST00000445369 C16orf74Q96GX8 76 aa12.73□□□□□ -0.37
CLDN9-201ENST00000445369 PSMB2P49721 201 aa12.73□□□□□ -0.37
CLDN9-201ENST00000445369 DAZ4Q86SG3 579 aaKnown RBP12.73□□□□□ -0.37
CLDN9-201ENST00000445369 DAZ3Q9NR90 486 aaKnown RBP12.73□□□□□ -0.37
CLDN9-201ENST00000445369 ACANP16112 2415 aa12.72□□□□□ -0.37
CLDN9-201ENST00000445369 LINC00694P0DN24 101 aa12.72□□□□□ -0.37
CLDN9-201ENST00000445369 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
CLDN9-201ENST00000445369 DGAT2L7PQ6IED9 249 aa12.72□□□□□ -0.37
CLDN9-201ENST00000445369 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
CLDN9-201ENST00000445369 UNC79Q9P2D8 2635 aa12.72□□□□□ -0.37
CLDN9-201ENST00000445369 A8MZ25 164 aa12.71□□□□□ -0.37
CLDN9-201ENST00000445369 IGHV3-33P01772 117 aa12.71□□□□□ -0.37
CLDN9-201ENST00000445369 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
CLDN9-201ENST00000445369 CSNK1G2-AS1Q8NCQ2 148 aa12.71□□□□□ -0.37
CLDN9-201ENST00000445369 CDKN2A-AS1Q9UH64 79 aa12.71□□□□□ -0.37
CLDN9-201ENST00000445369 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.71□□□□□ -0.38
CLDN9-201ENST00000445369 TCL1BO95988 128 aa12.71□□□□□ -0.38
CLDN9-201ENST00000445369 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.38
CLDN9-201ENST00000445369 SBSPONQ8IVN8 264 aa12.71□□□□□ -0.38
CLDN9-201ENST00000445369 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.38
CLDN9-201ENST00000445369 SPANXDQ9BXN6 97 aa12.71□□□□□ -0.38
CLDN9-201ENST00000445369 SPANXCQ9NY87 97 aa12.71□□□□□ -0.38
CLDN9-201ENST00000445369 CSDC2Q9Y534 153 aaKnown RBP12.71□□□□□ -0.38
CLDN9-201ENST00000445369 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
CLDN9-201ENST00000445369 C1QTNF4Q9BXJ3 329 aa12.7□□□□□ -0.38
CLDN9-201ENST00000445369 FAM19A3Q7Z5A8 133 aa12.69□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE4Q13068 117 aa12.69□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE5Q13069 117 aa12.69□□□□□ -0.38
CLDN9-201ENST00000445369 ADAMTSL4-AS1Q5T5F5 129 aa12.69□□□□□ -0.38
CLDN9-201ENST00000445369 COX6A2Q02221 97 aa12.68□□□□□ -0.38
CLDN9-201ENST00000445369 SMR3AQ99954 134 aa12.68□□□□□ -0.38
CLDN9-201ENST00000445369 HERVK_113P63121 156 aa12.68□□□□□ -0.38
CLDN9-201ENST00000445369 LINC00242Q5T6M2 205 aa12.68□□□□□ -0.38
CLDN9-201ENST00000445369 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
CLDN9-201ENST00000445369 J3QR89 54 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE7O76087 117 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE12FP0CL80 117 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE12GP0CL81 117 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 GAGE12IP0CL82 117 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 MIAQ16674 131 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
CLDN9-201ENST00000445369 ATP6V0E2Q8NHE4 81 aa12.66□□□□□ -0.38
CLDN9-201ENST00000445369 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
CLDN9-201ENST00000445369 NDUFA1O15239 70 aa12.66□□□□□ -0.38
CLDN9-201ENST00000445369 CIDEAO60543 219 aa12.66□□□□□ -0.38
CLDN9-201ENST00000445369 TIMM17BO60830 172 aa12.66□□□□□ -0.38
CLDN9-201ENST00000445369 GTSF1LQ9H1H1 148 aa12.66□□□□□ -0.38
CLDN9-201ENST00000445369 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
CLDN9-201ENST00000445369 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.38
CLDN9-201ENST00000445369 KRTAP10-3P60369 221 aa12.65□□□□□ -0.38
CLDN9-201ENST00000445369 MTORP42345 2549 aa12.65□□□□□ -0.38
CLDN9-201ENST00000445369 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.39
CLDN9-201ENST00000445369 SCGB1C2P0DMR2 95 aa12.65□□□□□ -0.39
CLDN9-201ENST00000445369 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.39
CLDN9-201ENST00000445369 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.39
CLDN9-201ENST00000445369 HECTD1Q9ULT8 2610 aa12.65□□□□□ -0.39
CLDN9-201ENST00000445369 PRSS2P07478 247 aa12.64□□□□□ -0.39
CLDN9-201ENST00000445369 SMAGPQ0VAQ4 97 aa12.64□□□□□ -0.39
CLDN9-201ENST00000445369 INSL3P51460 131 aa12.63□□□□□ -0.39
CLDN9-201ENST00000445369 LOC100131303A0A0U1RQF7 123 aa12.63□□□□□ -0.39
CLDN9-201ENST00000445369 H7C2G1 150 aa12.63□□□□□ -0.39
CLDN9-201ENST00000445369 SETD2Q9BYW2 2564 aaPredicted RBP12.62□□□□□ -0.39
CLDN9-201ENST00000445369 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
CLDN9-201ENST00000445369 SMIM1B2RUZ4 78 aa12.62□□□□□ -0.39
CLDN9-201ENST00000445369 RNF183Q96D59 192 aa12.62□□□□□ -0.39
CLDN9-201ENST00000445369 TMEM243Q9BU79 118 aa12.62□□□□□ -0.39
CLDN9-201ENST00000445369 JMJD1CQ15652 2540 aa12.62□□□□□ -0.39
CLDN9-201ENST00000445369 TRAV13-1A0A0B4J241 112 aa12.61□□□□□ -0.39
CLDN9-201ENST00000445369 LY6G6DO95868 133 aa12.61□□□□□ -0.39
CLDN9-201ENST00000445369 FOXI1Q12951 378 aa12.61□□□□□ -0.39
CLDN9-201ENST00000445369 LINC00482Q8N8I6 264 aa12.61□□□□□ -0.39
CLDN9-201ENST00000445369 Q1RN00 199 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 TRGV4A0A0C4DH28 118 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 H7C423 109 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 UBE2L6O14933 153 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 PF4P02776 101 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 IFITM1P13164 125 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 NPC2P61916 151 aa12.6□□□□□ -0.39
CLDN9-201ENST00000445369 TRBV30A0A0K0K1B3 111 aa12.59□□□□□ -0.39
CLDN9-201ENST00000445369 F5H768 121 aa12.59□□□□□ -0.39
CLDN9-201ENST00000445369 FHL2Q14192 279 aa12.59□□□□□ -0.39
CLDN9-201ENST00000445369 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
CLDN9-201ENST00000445369 Q9H8V8 135 aa12.59□□□□□ -0.39
CLDN9-201ENST00000445369 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms