RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 M0QY20 66 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 POLR2KP53803 58 aaKnown RBP6.44□□□□□ -1.38
LINC00642-203ENST00000444942 ODF1Q14990 250 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 C2orf66Q6UXQ4 117 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 C2orf88Q9BSF0 95 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 CYSLTR1Q9Y271 337 aa6.44□□□□□ -1.38
LINC00642-203ENST00000444942 IGHV3-73A0A0B4J1V6 119 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 TRGV4A0A0C4DH28 118 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 DPM2O94777 84 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 IGKCP01834 107 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 P0DMU3 169 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 FAM231AP0DMU4 169 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 FAM231CP0DMU5 169 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 Q5VSD8 79 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 ZFP2Q6ZN57 461 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 NEGR1Q7Z3B1 354 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 ZNF479Q96JC4 524 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 SNHG12Q9BXW3 62 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 PLA2G2DQ9UNK4 145 aa6.43□□□□□ -1.38
LINC00642-203ENST00000444942 A0A087WX48 190 aa6.42□□□□□ -1.38
LINC00642-203ENST00000444942 A0A096LPF7 62 aa6.42□□□□□ -1.38
LINC00642-203ENST00000444942 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
LINC00642-203ENST00000444942 RHOHQ15669 191 aa6.42□□□□□ -1.38
LINC00642-203ENST00000444942 C15orf53Q8NAA6 179 aa6.42□□□□□ -1.38
LINC00642-203ENST00000444942 OR4C5Q8NGB2 326 aa6.42□□□□□ -1.38
LINC00642-203ENST00000444942 MRPS16Q9Y3D3 137 aaKnown RBP6.42□□□□□ -1.38
LINC00642-203ENST00000444942 RS1O15537 224 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 PAX4O43316 350 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 COX8AP10176 69 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 TNP2Q05952 138 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 FHL2Q14192 279 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 CFAP126Q5VTH2 177 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 ERASQ7Z444 233 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 VSIG2Q96IQ7 327 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
LINC00642-203ENST00000444942 TRAV4A0A0B4J268 109 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 LOC100131303A0A0U1RQF7 123 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 F8VRH5 84 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 I3L3M4 83 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 PLNP26678 52 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 BATFQ16520 125 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 C1orf134Q5TEV5 83 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 TMEM141Q96I45 108 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.39
LINC00642-203ENST00000444942 HHLA3Q9XRX5 114 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 CHTOPQ9Y3Y2 248 aaKnown RBP6.4□□□□□ -1.39
LINC00642-203ENST00000444942 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.39
LINC00642-203ENST00000444942 CRYBA4P53673 196 aa6.39□□□□□ -1.39
LINC00642-203ENST00000444942 STPG4Q8N801 248 aa6.39□□□□□ -1.39
LINC00642-203ENST00000444942 NEXN-AS1Q8NBZ9 246 aa6.39□□□□□ -1.39
LINC00642-203ENST00000444942 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
LINC00642-203ENST00000444942 TIMM17AQ99595 171 aa6.39□□□□□ -1.39
LINC00642-203ENST00000444942 PRO0255Q9UI72 69 aa6.39□□□□□ -1.39
LINC00642-203ENST00000444942 TSHBP01222 138 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 GYPEP15421 78 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 NMUP48645 174 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 CCL18P55774 89 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 ESRGQ1W209 222 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 ZC2HC1BQ5TFG8 222 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 LINC00588Q9Y4M8 146 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 ICOSQ9Y6W8 199 aa6.38□□□□□ -1.39
LINC00642-203ENST00000444942 A0A1B0GV90 55 aa6.37□□□□□ -1.39
LINC00642-203ENST00000444942 DLEU1O43261 78 aa6.37□□□□□ -1.39
LINC00642-203ENST00000444942 HINT1P49773 126 aaPredicted RBP6.37□□□□□ -1.39
LINC00642-203ENST00000444942 RPL39P62891 51 aaKnown RBP6.37□□□□□ -1.39
LINC00642-203ENST00000444942 TMEM97Q5BJF2 176 aa6.37□□□□□ -1.39
LINC00642-203ENST00000444942 COL5A1-AS1Q5SY13 56 aa6.37□□□□□ -1.39
LINC00642-203ENST00000444942 DEFB104AQ8WTQ1 72 aa6.37□□□□□ -1.39
LINC00642-203ENST00000444942 TP73-AS1Q9UF72 201 aa6.37□□□□□ -1.39
LINC00642-203ENST00000444942 IGIPA6NJ69 53 aa6.36□□□□□ -1.39
LINC00642-203ENST00000444942 FGF6P10767 208 aa6.36□□□□□ -1.39
LINC00642-203ENST00000444942 PMVKQ15126 192 aa6.36□□□□□ -1.39
LINC00642-203ENST00000444942 PAPPA-AS1Q5QFB9 102 aa6.36□□□□□ -1.39
LINC00642-203ENST00000444942 BOD1L2Q8IYS8 172 aa6.36□□□□□ -1.39
LINC00642-203ENST00000444942 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
LINC00642-203ENST00000444942 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
LINC00642-203ENST00000444942 H3BNG1 76 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 K7EQD1 137 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 SIVA1O15304 175 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 CIDEAO60543 219 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 MRPL23Q16540 153 aaKnown RBP6.35□□□□□ -1.39
LINC00642-203ENST00000444942 Q6ZSN1 163 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 SLC25A29Q8N8R3 303 aa6.35□□□□□ -1.39
LINC00642-203ENST00000444942 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
LINC00642-203ENST00000444942 HERVK_113P61574 105 aa6.34□□□□□ -1.39
LINC00642-203ENST00000444942 RPL36AP83881 106 aaKnown RBP6.34□□□□□ -1.39
LINC00642-203ENST00000444942 COTL1Q14019 142 aa6.34□□□□□ -1.39
LINC00642-203ENST00000444942 ZNRF2Q8NHG8 242 aa6.34□□□□□ -1.39
LINC00642-203ENST00000444942 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
LINC00642-203ENST00000444942 IGKV2D-26A0A0A0MRZ7 120 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 GAGE12JA6NER3 117 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms