RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 UBE2D2P62837 147 aa12.27□□□□□ -0.45
CCDC197-202ENST00000444118 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
CCDC197-202ENST00000444118 LINC00612Q8N6U2 182 aa12.27□□□□□ -0.45
CCDC197-202ENST00000444118 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
CCDC197-202ENST00000444118 TRBV6-4A0A1B0GX49 114 aa12.26□□□□□ -0.45
CCDC197-202ENST00000444118 KRTAP21-3Q3LHN1 58 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 KIR2DL5BQ8NHK3 375 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 TIMM21Q9BVV7 248 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 GEMIN7Q9H840 131 aaKnown RBP12.25□□□□□ -0.45
CCDC197-202ENST00000444118 X6R8D5 127 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
CCDC197-202ENST00000444118 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
CCDC197-202ENST00000444118 SMIM9A6NGZ8 99 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
CCDC197-202ENST00000444118 TAL2Q16559 108 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 TMEM170BQ5T4T1 132 aa12.25□□□□□ -0.45
CCDC197-202ENST00000444118 CEMP1Q6PRD7 247 aaPredicted RBP12.25□□□□□ -0.45
CCDC197-202ENST00000444118 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
CCDC197-202ENST00000444118 FBN1P35555 2871 aaKnown RBP12.24□□□□□ -0.45
CCDC197-202ENST00000444118 ZNF22P17026 224 aaPredicted RBP12.23□□□□□ -0.45
CCDC197-202ENST00000444118 KRTAP24-1Q3LI83 254 aa12.23□□□□□ -0.45
CCDC197-202ENST00000444118 A0A1W2PPM0 123 aa12.23□□□□□ -0.45
CCDC197-202ENST00000444118 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
CCDC197-202ENST00000444118 FABP2P12104 132 aa12.23□□□□□ -0.45
CCDC197-202ENST00000444118 SPCS1Q9Y6A9 102 aa12.23□□□□□ -0.45
CCDC197-202ENST00000444118 A0A0J9YXV3 536 aa12.22□□□□□ -0.45
CCDC197-202ENST00000444118 NTM-AS1Q6ZSK4 140 aa12.22□□□□□ -0.45
CCDC197-202ENST00000444118 Q6ZUT4 128 aa12.22□□□□□ -0.45
CCDC197-202ENST00000444118 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
CCDC197-202ENST00000444118 ZNF815PA8K554 130 aa12.21□□□□□ -0.45
CCDC197-202ENST00000444118 FXYD2P54710 66 aa12.21□□□□□ -0.45
CCDC197-202ENST00000444118 FHL2Q14192 279 aa12.21□□□□□ -0.45
CCDC197-202ENST00000444118 SBSPONQ8IVN8 264 aa12.21□□□□□ -0.45
CCDC197-202ENST00000444118 CEND1Q8N111 149 aa12.21□□□□□ -0.45
CCDC197-202ENST00000444118 GAGE12JA6NER3 117 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 F8W1H4 67 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 H3BUT2 72 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 APOC4P55056 127 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 TSPEAR-AS2P59090 65 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 GAGE4Q13068 117 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 GAGE5Q13069 117 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 GAGE13Q4V321 117 aa12.21□□□□□ -0.46
CCDC197-202ENST00000444118 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.46
CCDC197-202ENST00000444118 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
CCDC197-202ENST00000444118 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
CCDC197-202ENST00000444118 GCSHP23434 173 aa12.2□□□□□ -0.46
CCDC197-202ENST00000444118 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
CCDC197-202ENST00000444118 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
CCDC197-202ENST00000444118 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
CCDC197-202ENST00000444118 J3QQQ9 107 aa12.18□□□□□ -0.46
CCDC197-202ENST00000444118 LEPROTO15243 131 aa12.18□□□□□ -0.46
CCDC197-202ENST00000444118 RNASE13Q5GAN3 156 aaKnown RBP12.18□□□□□ -0.46
CCDC197-202ENST00000444118 MDFIQ99750 246 aa12.18□□□□□ -0.46
CCDC197-202ENST00000444118 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
CCDC197-202ENST00000444118 LOC100131303A0A0U1RQF7 123 aa12.17□□□□□ -0.46
CCDC197-202ENST00000444118 UBE2D1P51668 147 aa12.17□□□□□ -0.46
CCDC197-202ENST00000444118 PLEKHB2Q96CS7 222 aa12.17□□□□□ -0.46
CCDC197-202ENST00000444118 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
CCDC197-202ENST00000444118 HIST1H4GQ99525 98 aa12.16□□□□□ -0.46
CCDC197-202ENST00000444118 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
CCDC197-202ENST00000444118 LYRM9A8MSI8 78 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 IGLV5-45A0A087WSX0 123 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 A0A0J9YY99 117 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 DEFB130BP0DP73 79 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 DEFB130AP0DP74 79 aa12.15□□□□□ -0.46
CCDC197-202ENST00000444118 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
CCDC197-202ENST00000444118 H7C423 109 aa12.14□□□□□ -0.47
CCDC197-202ENST00000444118 FAM19A3Q7Z5A8 133 aa12.14□□□□□ -0.47
CCDC197-202ENST00000444118 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
CCDC197-202ENST00000444118 ERG28Q9UKR5 140 aa12.14□□□□□ -0.47
CCDC197-202ENST00000444118 TIRAPP58753 221 aa12.13□□□□□ -0.47
CCDC197-202ENST00000444118 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
CCDC197-202ENST00000444118 GAGE6Q13070 117 aa12.13□□□□□ -0.47
CCDC197-202ENST00000444118 SMIM13P0DJ93 91 aa12.12□□□□□ -0.47
CCDC197-202ENST00000444118 IGHV3-30-3P0DP02 117 aa12.12□□□□□ -0.47
CCDC197-202ENST00000444118 IGHV4-30-4P0DP06 118 aa12.12□□□□□ -0.47
CCDC197-202ENST00000444118 SAMD5Q5TGI4 173 aa12.12□□□□□ -0.47
CCDC197-202ENST00000444118 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
CCDC197-202ENST00000444118 IGHV1-58A0A0C4DH39 117 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 A0A1B0GWB2 263 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 NHP2Q9NX24 153 aaKnown RBP12.11□□□□□ -0.47
CCDC197-202ENST00000444118 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 MIFP14174 115 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 Q8NAQ8 132 aa12.11□□□□□ -0.47
CCDC197-202ENST00000444118 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
CCDC197-202ENST00000444118 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
CCDC197-202ENST00000444118 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 UBE2L6O14933 153 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 RNF183Q96D59 192 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 TRAV8-3A0A0A6YYJ7 113 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 K7ERJ3 54 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 HERVK_113P63121 156 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
CCDC197-202ENST00000444118 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms