RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 GAGE5Q13069 117 aa13.71□□□□□ -0.21
PAXBP1-204ENST00000443785 TRBV20-1A0A075B6N2 111 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 A0A1B0GV72 72 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 CRLF1O75462 422 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 LITAFQ99732 161 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 IGHV1-58A0A0C4DH39 117 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 ZNF415Q09FC8 603 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 Q6ZTI0 123 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 LINC01620Q4KN68 170 aa13.7□□□□□ -0.22
PAXBP1-204ENST00000443785 CRYBA4P53673 196 aa13.69□□□□□ -0.22
PAXBP1-204ENST00000443785 VSIG2Q96IQ7 327 aa13.69□□□□□ -0.22
PAXBP1-204ENST00000443785 ODF3Q96PU9 254 aa13.69□□□□□ -0.22
PAXBP1-204ENST00000443785 A0A096LNT2 108 aa13.69□□□□□ -0.22
PAXBP1-204ENST00000443785 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
PAXBP1-204ENST00000443785 LOC100131303A0A0U1RQF7 123 aa13.68□□□□□ -0.22
PAXBP1-204ENST00000443785 RPL13AP40429 203 aaKnown RBP13.68□□□□□ -0.22
PAXBP1-204ENST00000443785 MRPS36P82909 103 aaKnown RBP13.68□□□□□ -0.22
PAXBP1-204ENST00000443785 Q9H8V8 135 aa13.68□□□□□ -0.22
PAXBP1-204ENST00000443785 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
PAXBP1-204ENST00000443785 RNF183Q96D59 192 aa13.67□□□□□ -0.22
PAXBP1-204ENST00000443785 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
PAXBP1-204ENST00000443785 ICOSQ9Y6W8 199 aa13.67□□□□□ -0.22
PAXBP1-204ENST00000443785 STHQ8IWL8 128 aa13.66□□□□□ -0.22
PAXBP1-204ENST00000443785 C11orf72Q8NBR9 251 aa13.66□□□□□ -0.22
PAXBP1-204ENST00000443785 TRAV4A0A0B4J268 109 aa13.66□□□□□ -0.22
PAXBP1-204ENST00000443785 DEFB114Q30KQ6 69 aa13.66□□□□□ -0.22
PAXBP1-204ENST00000443785 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
PAXBP1-204ENST00000443785 NOP10Q9NPE3 64 aaKnown RBP13.66□□□□□ -0.22
PAXBP1-204ENST00000443785 ODF3L2Q3SX64 289 aa13.65□□□□□ -0.22
PAXBP1-204ENST00000443785 TOMM7Q9P0U1 55 aa13.65□□□□□ -0.22
PAXBP1-204ENST00000443785 ATXN8Q156A1 80 aa13.65□□□□□ -0.22
PAXBP1-204ENST00000443785 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
PAXBP1-204ENST00000443785 MEIG1Q5JSS6 88 aa13.64□□□□□ -0.23
PAXBP1-204ENST00000443785 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 INSP01308 110 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 A0A0B4J2C4 111 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 SCGB1A1P11684 91 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 ATP6V0E2Q8NHE4 81 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 C11orf68Q9H3H3 251 aaKnown RBP13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 GAGE7O76087 117 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 GAGE12FP0CL80 117 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 GAGE12GP0CL81 117 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 GAGE12IP0CL82 117 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 PIK3CD-AS1Q5SR53 167 aa13.63□□□□□ -0.23
PAXBP1-204ENST00000443785 CR1P17927 2039 aa13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 FASNP49327 2511 aaKnown RBP13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 C1orf158Q8N1D5 194 aa13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 PEMTQ9UBM1 199 aa13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 VWFP04275 2813 aa13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 UBR5O95071 2799 aaPredicted RBP13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 SVIPQ8NHG7 77 aa13.62□□□□□ -0.23
PAXBP1-204ENST00000443785 MIAQ16674 131 aa13.61□□□□□ -0.23
PAXBP1-204ENST00000443785 Q8N2B8 174 aa13.61□□□□□ -0.23
PAXBP1-204ENST00000443785 H7C423 109 aa13.61□□□□□ -0.23
PAXBP1-204ENST00000443785 WFDC11Q8NEX6 87 aa13.61□□□□□ -0.23
PAXBP1-204ENST00000443785 HECTD1Q9ULT8 2610 aa13.61□□□□□ -0.23
PAXBP1-204ENST00000443785 PYGO1Q9Y3Y4 419 aa13.6□□□□□ -0.23
PAXBP1-204ENST00000443785 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
PAXBP1-204ENST00000443785 DSCR9P59020 149 aa13.6□□□□□ -0.23
PAXBP1-204ENST00000443785 NTM-AS1Q6ZSK4 140 aa13.6□□□□□ -0.23
PAXBP1-204ENST00000443785 PRIMA1Q86XR5 153 aa13.6□□□□□ -0.23
PAXBP1-204ENST00000443785 ANAPC13Q9BS18 74 aa13.6□□□□□ -0.23
PAXBP1-204ENST00000443785 LINC00242Q5T6M2 205 aa13.59□□□□□ -0.23
PAXBP1-204ENST00000443785 TENM4Q6N022 2769 aa13.59□□□□□ -0.23
PAXBP1-204ENST00000443785 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
PAXBP1-204ENST00000443785 C3orf56Q8N813 242 aa13.58□□□□□ -0.24
PAXBP1-204ENST00000443785 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
PAXBP1-204ENST00000443785 SBSPONQ8IVN8 264 aa13.58□□□□□ -0.24
PAXBP1-204ENST00000443785 TRAV8-4A0A0B4J246 113 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 SOSTDC1Q6X4U4 206 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 TEX29Q8N6K0 151 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 SPANXA1Q9NS26 97 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 UBE2WQ96B02 151 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 HELZ2Q9BYK8 2649 aaKnown RBP13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 A0A096LPF7 62 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 SNCGO76070 127 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 GAGE6Q13070 117 aa13.57□□□□□ -0.24
PAXBP1-204ENST00000443785 ZFAND6Q6FIF0 208 aa13.56□□□□□ -0.24
PAXBP1-204ENST00000443785 COX6CP09669 75 aa13.56□□□□□ -0.24
PAXBP1-204ENST00000443785 C15orf53Q8NAA6 179 aa13.56□□□□□ -0.24
PAXBP1-204ENST00000443785 J3QLI3 93 aa13.55□□□□□ -0.24
PAXBP1-204ENST00000443785 TRBV10-2A0A0K0K1G8 114 aa13.55□□□□□ -0.24
PAXBP1-204ENST00000443785 C4orf3Q8WVX3 66 aa13.55□□□□□ -0.24
PAXBP1-204ENST00000443785 ESM1Q9NQ30 184 aa13.54□□□□□ -0.24
PAXBP1-204ENST00000443785 TRBV30A0A0K0K1B3 111 aa13.54□□□□□ -0.24
PAXBP1-204ENST00000443785 CCL24O00175 119 aa13.54□□□□□ -0.24
PAXBP1-204ENST00000443785 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
PAXBP1-204ENST00000443785 SS18L2Q9UHA2 77 aa13.54□□□□□ -0.24
PAXBP1-204ENST00000443785 DEFB113Q30KQ7 82 aa13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 LINC00308Q8TCZ7 52 aa13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 RPL36AP83881 106 aaKnown RBP13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 GAGE2BQ13066 116 aa13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 GAGE2EQ4V326 116 aa13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 RPL36ALQ969Q0 106 aaKnown RBP13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 Q9HAA7 133 aa13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 GAGE2DQ9UEU5 116 aa13.53□□□□□ -0.24
PAXBP1-204ENST00000443785 DNAJC9-AS1A6NH13 148 aa13.52□□□□□ -0.24
PAXBP1-204ENST00000443785 B5MCH6 92 aa13.52□□□□□ -0.24
PAXBP1-204ENST00000443785 RS1O15537 224 aa13.52□□□□□ -0.24
PAXBP1-204ENST00000443785 DEFB130BP0DP73 79 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms