RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ORMDL1Q9P0S3 153 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 PFN2P35080 140 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 PRORYQ9H606 182 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 IGKV3OR2-268A0A0C4DH90 116 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 KLLNB2CW77 178 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 LINC00467Q9BRT7 94 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 TRANK1O15050 2925 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 TMEM86BQ8N661 226 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 LY6EQ16553 131 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 DYNLRB2Q8TF09 96 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 TOMM7Q9P0U1 55 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 UBE2L6O14933 153 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 ENHOQ6UWT2 76 aa3.7□□□□□ -1.82
HERC1-201ENST00000443617 TRAV23DV6A0A075B6W5 121 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 SAA4P35542 130 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 UPK3BQ9BT76 320 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 IGHV3-38A0A0C4DH36 116 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 SPINK13Q1W4C9 94 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 SND1-IT1Q9HBX3 110 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 PF4P02776 101 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 UBL5Q9BZL1 73 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 C20orf197Q8N268 126 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 UBE2DNLQ8IWF7 75 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 RANBP2P49792 3224 aaKnown RBP3.69□□□□□ -1.82
HERC1-201ENST00000443617 C5orf56Q8N8D9 126 aa3.69□□□□□ -1.82
HERC1-201ENST00000443617 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 SMIM26A0A096LP01 95 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 LECT2O14960 151 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 SLPIP03973 132 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 LAMTOR3Q9UHA4 124 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 IGLV5-39A0A0G2JS06 123 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 K7EMT4 169 aa3.68□□□□□ -1.82
HERC1-201ENST00000443617 CCL21O00585 134 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 J3QLI3 93 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 PROK1P58294 105 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 C2orf48Q96LS8 159 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 ATRQ13535 2644 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 TRGV1A0A0A0MS02 117 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 V9GYY9 64 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 RPL35AP18077 110 aaKnown RBP3.67□□□□□ -1.82
HERC1-201ENST00000443617 COX7B2Q8TF08 81 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 CCKP06307 115 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 PCSK5Q92824 1860 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 CCL19Q99731 98 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 H3BUA1 57 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 PSMB8P28062 276 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 IGF2-ASQ6U949 168 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 FAM218AQ96MZ4 157 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 LINC00846Q9NV44 126 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 A0A087WVE0 104 aa3.67□□□□□ -1.82
HERC1-201ENST00000443617 CHCHD7Q9BUK0 85 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 A0A087WYN8 130 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 Q6ZSN1 163 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 Q8N2B8 174 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 PDE6GP18545 87 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 ITPR3Q14573 2671 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 COX6A2Q02221 97 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 APRG1Q8IVJ8 170 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 FAM19A1Q7Z5A9 133 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 CHD6Q8TD26 2715 aa3.66□□□□□ -1.82
HERC1-201ENST00000443617 HTTP42858 3142 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 KLK9Q2XQG4 91 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 PKIGQ9Y2B9 76 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 A0A0U1RQV1 116 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 NBL1P41271 181 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 INSP01308 110 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 WFDC9Q8NEX5 89 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 UBE2D4Q9Y2X8 147 aa3.65□□□□□ -1.82
HERC1-201ENST00000443617 IGLV5-45A0A087WSX0 123 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 WFDC11Q8NEX6 87 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 IGHV3OR16-12A0A075B7B8 117 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 RPL28P46779 137 aaKnown RBP3.65□□□□□ -1.83
HERC1-201ENST00000443617 PLA2G2CQ5R387 149 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 LINC00242Q5T6M2 205 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 XCL1P47992 114 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 XCL2Q9UBD3 114 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 HAMPP81172 84 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 LINC00337Q8N6G1 96 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 SMIM11BQ8TCY0 68 aa3.65□□□□□ -1.83
HERC1-201ENST00000443617 TRAV7A0A075B6U4 112 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 HILS1P60008 231 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 NDUFC1O43677 76 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 TMEM256-PLSCR3K7ERE1 68 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 IGHV3-53P01767 116 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 SEC61GP60059 68 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
HERC1-201ENST00000443617 NOTCH1P46531 2555 aa3.64□□□□□ -1.83
HERC1-201ENST00000443617 FLG2Q5D862 2391 aaPredicted RBP3.64□□□□□ -1.83
HERC1-201ENST00000443617 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 SOSTDC1Q6X4U4 206 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 CCL18P55774 89 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms