RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 IGLV4-60A0A075B6I1 120 aa6.85□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TNFRSF6BO95407 300 aa6.85□□□□□ -1.31
HLA-DQB1-206ENST00000443574 GCSHP23434 173 aa6.85□□□□□ -1.31
HLA-DQB1-206ENST00000443574 RPL32P62910 135 aaKnown RBP6.85□□□□□ -1.31
HLA-DQB1-206ENST00000443574 RHEBQ15382 184 aa6.85□□□□□ -1.31
HLA-DQB1-206ENST00000443574 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
HLA-DQB1-206ENST00000443574 LRP1BQ9NZR2 4599 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 ESDP10768 282 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 TMEM136Q6ZRR5 245 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 PRELID3AQ96N28 172 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 CARHSP1Q9Y2V2 147 aaKnown RBP6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
HLA-DQB1-206ENST00000443574 NPYP01303 97 aa6.83□□□□□ -1.32
HLA-DQB1-206ENST00000443574 RAB5AP20339 215 aa6.83□□□□□ -1.32
HLA-DQB1-206ENST00000443574 MRPL52Q86TS9 123 aaKnown RBP6.83□□□□□ -1.32
HLA-DQB1-206ENST00000443574 MAPKAPK5-AS1Q8N8E1 139 aa6.83□□□□□ -1.32
HLA-DQB1-206ENST00000443574 MAP1LC3AQ9H492 121 aa6.83□□□□□ -1.32
HLA-DQB1-206ENST00000443574 USP17L23D6RBM5 183 aa6.82□□□□□ -1.32
HLA-DQB1-206ENST00000443574 WFDC2Q14508 124 aa6.82□□□□□ -1.32
HLA-DQB1-206ENST00000443574 COX19Q49B96 90 aa6.82□□□□□ -1.32
HLA-DQB1-206ENST00000443574 FUSP35637 526 aaKnown RBP eCLIP6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 SS18Q15532 418 aa6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 C10orf91Q5T1B1 145 aa6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 SVBPQ8N300 66 aa6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 CLRN3Q8NCR9 226 aa6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 RPS10P5Q9NQ39 176 aa6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 CSDC2Q9Y534 153 aaKnown RBP6.81□□□□□ -1.32
HLA-DQB1-206ENST00000443574 SNAPINO95295 136 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 APOC3P02656 99 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 MT-ND6P03923 174 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 SPANXA1Q9NS26 97 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 UBE2D4Q9Y2X8 147 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 HERC2O95714 4834 aa6.8□□□□□ -1.32
HLA-DQB1-206ENST00000443574 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 K7EMI3 77 aa6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 CCL25O15444 150 aa6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
HLA-DQB1-206ENST00000443574 hDV102S1A0JD36 115 aa6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 IFI27P40305 119 aaPredicted RBP6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 ORMDL2Q53FV1 153 aa6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 KRTAP26-1Q6PEX3 210 aa6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 GNB1LQ9BYB4 327 aa6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 HSPG2P98160 4391 aa6.78□□□□□ -1.32
HLA-DQB1-206ENST00000443574 RYR1P21817 5038 aa6.77□□□□□ -1.32
HLA-DQB1-206ENST00000443574 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 LINC00959A0A1B0GUT2 108 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 PRSS47A8MTI9 375 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 C1orf196B1AJZ1 125 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 G0S2P27469 103 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 XCL1P47992 114 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 Q8N8P6 123 aa6.77□□□□□ -1.33
HLA-DQB1-206ENST00000443574 PRSS1P07477 247 aa6.76□□□□□ -1.33
HLA-DQB1-206ENST00000443574 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
HLA-DQB1-206ENST00000443574 Q6ZUT4 128 aa6.76□□□□□ -1.33
HLA-DQB1-206ENST00000443574 CYSLTR1Q9Y271 337 aa6.76□□□□□ -1.33
HLA-DQB1-206ENST00000443574 PKIGQ9Y2B9 76 aa6.76□□□□□ -1.33
HLA-DQB1-206ENST00000443574 CNBPP62633 177 aaKnown RBP6.75□□□□□ -1.33
HLA-DQB1-206ENST00000443574 MRPS36P82909 103 aaKnown RBP6.75□□□□□ -1.33
HLA-DQB1-206ENST00000443574 CD164L2Q6UWJ8 174 aa6.75□□□□□ -1.33
HLA-DQB1-206ENST00000443574 Q6ZN92 141 aa6.75□□□□□ -1.33
HLA-DQB1-206ENST00000443574 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 IFITM10A6NMD0 228 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 MALP21145 153 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 FOXI1Q12951 378 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 RNASE13Q5GAN3 156 aaKnown RBP6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 Q8N1X5 172 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 C15orf56Q8N910 161 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 PYGO1Q9Y3Y4 419 aa6.74□□□□□ -1.33
HLA-DQB1-206ENST00000443574 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 COX7A2LO14548 114 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 APOMO95445 188 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 FABP9Q0Z7S8 132 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 PAPPA-AS1Q5QFB9 102 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 XP32Q5T750 250 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 PRSS3P2Q8NHM4 247 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 TMEM141Q96I45 108 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
HLA-DQB1-206ENST00000443574 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
HLA-DQB1-206ENST00000443574 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms