RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
HDAC6-211ENST00000443563 LRP1BQ9NZR2 4599 aa7.18□□□□□ -1.26
HDAC6-211ENST00000443563 K7EMI3 77 aa7.17□□□□□ -1.26
HDAC6-211ENST00000443563 ZNF664Q8N3J9 261 aa7.17□□□□□ -1.26
HDAC6-211ENST00000443563 MAPKAPK5-AS1Q8N8E1 139 aa7.17□□□□□ -1.26
HDAC6-211ENST00000443563 BAALCQ8WXS3 180 aa7.17□□□□□ -1.26
HDAC6-211ENST00000443563 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
HDAC6-211ENST00000443563 NXT2Q9NPJ8 142 aaKnown RBP7.17□□□□□ -1.26
HDAC6-211ENST00000443563 IGLV10-54A0A075B6I4 117 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 IGLV5-52A0A0A0MRZ9 124 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 LOC389332A0A1B0GUA5 103 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 G0S2P27469 103 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 ORMDL2Q53FV1 153 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 SLC7A5P1Q8MH63 180 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 Q8N8P6 123 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 UBE2D4Q9Y2X8 147 aa7.16□□□□□ -1.26
HDAC6-211ENST00000443563 LECT2O14960 151 aa7.15□□□□□ -1.26
HDAC6-211ENST00000443563 CCL25O15444 150 aa7.15□□□□□ -1.26
HDAC6-211ENST00000443563 FABP9Q0Z7S8 132 aa7.15□□□□□ -1.26
HDAC6-211ENST00000443563 SS18Q15532 418 aa7.15□□□□□ -1.26
HDAC6-211ENST00000443563 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
HDAC6-211ENST00000443563 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
HDAC6-211ENST00000443563 GCSHP23434 173 aa7.14□□□□□ -1.27
HDAC6-211ENST00000443563 KIAA1644Q3SXP7 199 aa7.14□□□□□ -1.27
HDAC6-211ENST00000443563 KRTAP26-1Q6PEX3 210 aa7.14□□□□□ -1.27
HDAC6-211ENST00000443563 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 LINC00959A0A1B0GUT2 108 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 IFI27P40305 119 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-211ENST00000443563 RPL39P62891 51 aaKnown RBP7.13□□□□□ -1.27
HDAC6-211ENST00000443563 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
HDAC6-211ENST00000443563 WFDC2Q14508 124 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 CFAP161Q6P656 301 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 PRSS3P2Q8NHM4 247 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-211ENST00000443563 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-211ENST00000443563 SMCO4Q9NRQ5 59 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 TRAPPC1Q9Y5R8 145 aa7.13□□□□□ -1.27
HDAC6-211ENST00000443563 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
HDAC6-211ENST00000443563 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-211ENST00000443563 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
HDAC6-211ENST00000443563 C1orf196B1AJZ1 125 aa7.12□□□□□ -1.27
HDAC6-211ENST00000443563 CYSLTR1Q9Y271 337 aa7.12□□□□□ -1.27
HDAC6-211ENST00000443563 PYGO1Q9Y3Y4 419 aa7.12□□□□□ -1.27
HDAC6-211ENST00000443563 LINC01549A6NIU2 74 aa7.11□□□□□ -1.27
HDAC6-211ENST00000443563 CDK2AP2O75956 126 aa7.11□□□□□ -1.27
HDAC6-211ENST00000443563 NPSP0C0P6 89 aa7.11□□□□□ -1.27
HDAC6-211ENST00000443563 Q6ZUT4 128 aa7.11□□□□□ -1.27
HDAC6-211ENST00000443563 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
HDAC6-211ENST00000443563 KIAA1109Q2LD37 5005 aa7.1□□□□□ -1.27
HDAC6-211ENST00000443563 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC6-211ENST00000443563 XCL1P47992 114 aa7.1□□□□□ -1.27
HDAC6-211ENST00000443563 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
HDAC6-211ENST00000443563 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
HDAC6-211ENST00000443563 AP5S1Q9NUS5 200 aa7.1□□□□□ -1.27
HDAC6-211ENST00000443563 TRAV13-1A0A0B4J241 112 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 hDV102S1A0JD36 115 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 PRSS1P07477 247 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 FOXI1Q12951 378 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 RNASE13Q5GAN3 156 aaKnown RBP7.09□□□□□ -1.27
HDAC6-211ENST00000443563 PAPPA-AS1Q5QFB9 102 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 Q6ZN92 141 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 FA2HQ7L5A8 372 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 TMEM141Q96I45 108 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 YPEL4Q96NS1 127 aa7.09□□□□□ -1.27
HDAC6-211ENST00000443563 HSPG2P98160 4391 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-211ENST00000443563 LINC01546A6NGU7 62 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 IFITM10A6NMD0 228 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 TEX43Q6ZNM6 134 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 CBLN2Q8IUK8 224 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 C2orf88Q9BSF0 95 aa7.08□□□□□ -1.28
HDAC6-211ENST00000443563 RYR1P21817 5038 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 IGLV4-3A0A075B6K6 122 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 IGHV1-58A0A0C4DH39 117 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 COX7A2LO14548 114 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 RAB5BP61020 215 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
HDAC6-211ENST00000443563 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 HERC2O95714 4834 aa7.07□□□□□ -1.28
HDAC6-211ENST00000443563 APOMO95445 188 aa7.06□□□□□ -1.28
HDAC6-211ENST00000443563 MALP21145 153 aa7.06□□□□□ -1.28
HDAC6-211ENST00000443563 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
HDAC6-211ENST00000443563 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
HDAC6-211ENST00000443563 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-211ENST00000443563 VCX2Q9H322 139 aa7.06□□□□□ -1.28
HDAC6-211ENST00000443563 GVQW2A0A096LPI5 108 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-211ENST00000443563 IGIPA6NJ69 53 aa7.05□□□□□ -1.28
HDAC6-211ENST00000443563 LINC00614P0C842 121 aa7.05□□□□□ -1.28
HDAC6-211ENST00000443563 ERASQ7Z444 233 aa7.05□□□□□ -1.28
HDAC6-211ENST00000443563 C9orf163Q8N9P6 203 aa7.05□□□□□ -1.28
HDAC6-211ENST00000443563 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
HDAC6-211ENST00000443563 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
HDAC6-211ENST00000443563 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
HDAC6-211ENST00000443563 SEC11AP67812 179 aa7.04□□□□□ -1.28
HDAC6-211ENST00000443563 HIGD2BQ4VC39 106 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms