RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 LRBAP50851 2863 aa3.28□□□□□ -1.88
HMGB3P9-201ENST00000441799 SPTBP11277 2137 aa3.28□□□□□ -1.89
HMGB3P9-201ENST00000441799 KIF26BQ2KJY2 2108 aa3.28□□□□□ -1.89
HMGB3P9-201ENST00000441799 AGRNO00468 2067 aa3.28□□□□□ -1.89
HMGB3P9-201ENST00000441799 A0A096LNJ9 63 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV7-81A0A0B4J1V7 117 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 LINC01546A6NGU7 62 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 M0R135 149 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGKV1-39P01597 117 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGKV3-20P01619 116 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV4-39P01824 125 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGKV1D-39P04432 117 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 FCER1GP30273 86 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 EIF4EBP1Q13541 118 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 C15orf32Q32M92 178 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 C9orf116Q5BN46 136 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 Q5VV11 94 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 DEFB119Q8N690 84 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 LIMD2Q9BT23 127 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 LHFPL6Q9Y693 200 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 DOCK11Q5JSL3 2073 aa3.27□□□□□ -1.89
HMGB3P9-201ENST00000441799 SETD2Q9BYW2 2564 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 F5P12259 2224 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3OR16-10A0A075B7F0 116 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-72A0A0B4J1Y9 119 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-38A0A0C4DH36 116 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGKV1-6A0A0C4DH72 117 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 NTN3O00634 580 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGKV1D-33P01593 117 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGKV1-33P01594 117 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 COX6CP09669 75 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV4-38-2P0DP08 117 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 C2orf83Q53S99 150 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 Q8N7P7 452 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 RETNLBQ9BQ08 111 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 GFRA4Q9GZZ7 299 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 COL4A2P08572 1712 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 FREM3P0C091 2139 aa3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 TDRD6O60522 2096 aaKnown RBP3.26□□□□□ -1.89
HMGB3P9-201ENST00000441799 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 LRP4O75096 1905 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 SDHAF1A6NFY7 115 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 K7EMI3 77 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGLV1-51P01701 117 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 PRSS1P07477 247 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 PRSS2P07478 247 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 CHTF8P0CG12 524 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 PLNP26678 52 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 TSPEAR-AS2P59090 65 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 C10orf128Q5T292 105 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 Q6ZS52 159 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 KLF14Q8TD94 323 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 TMEM263Q8WUH6 116 aaKnown RBP3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 CYYR1Q96J86 154 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 TTTY13Q9BZ97 58 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 KIAA2026Q5HYC2 2103 aa3.25□□□□□ -1.89
HMGB3P9-201ENST00000441799 ASXL3Q9C0F0 2248 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 THADAQ6YHU6 1953 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 TANC2Q9HCD6 1990 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGLV5-45A0A087WSX0 123 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-35A0A0C4DH35 117 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 ZNF815PA8K554 130 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 TSHBP01222 138 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 CCL3P10147 92 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 EDDM3BP56851 147 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 FXYD7P58549 80 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 FAM53AQ6NSI3 398 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 Q6ZR03 302 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 LYZL2Q7Z4W2 148 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 LYPD6Q86Y78 171 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 ZFAND2AQ8N6M9 145 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 Q8N814 137 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 SPTSSBQ8NFR3 76 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 LINC01560Q8TB33 94 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 TMEM14BQ9NUH8 114 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 LRRK2Q5S007 2527 aa3.24□□□□□ -1.89
HMGB3P9-201ENST00000441799 COL5A1P20908 1838 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 ITPR2Q14571 2701 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 BSNQ9UPA5 3926 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 NCOA6Q14686 2063 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-15A0A0B4J1V0 119 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 TRBV7-4A0A0J9YYF1 115 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 SPINK4O60575 86 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-30P01768 117 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 IGHV3-30-5P0DP03 117 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 RPL36AP83881 106 aaKnown RBP3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 FAM27BQ5VT28 67 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 OTOGQ6ZRI0 2925 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 DEFB124Q8NES8 71 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 BOD1L1Q8NFC6 3051 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 C1orf147Q96MC9 270 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 U3KQK5 164 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 AKAP9Q99996 3911 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 CENPEQ02224 2701 aa3.23□□□□□ -1.89
HMGB3P9-201ENST00000441799 APC2O95996 2303 aa3.22□□□□□ -1.89
HMGB3P9-201ENST00000441799 EML5Q05BV3 1969 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms