RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PPBPP02775 128 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 NDUFA6P56556 154 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 RAB5BP61020 215 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 DAD1P61803 113 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 Q0VG73 95 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 COA6Q5JTJ3 125 aaKnown RBP3.26□□□□□ -1.89
PTPN4-206ENST00000441089 NEGR1Q7Z3B1 354 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 SLC25A29Q8N8R3 303 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 NEXN-AS1Q8NBZ9 246 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
PTPN4-206ENST00000441089 TRGV4A0A0C4DH28 118 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 TRBV6-5A0A0K0K1A5 114 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 LOC389332A0A1B0GUA5 103 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 IFITM10A6NMD0 228 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 K7EQD1 137 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 SERF1AO75920 110 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 ATP5G1P05496 136 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 LINC00694P0DN24 101 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 IFI27P40305 119 aaPredicted RBP3.25□□□□□ -1.89
PTPN4-206ENST00000441089 CRYBA4P53673 196 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 POLR2KP53803 58 aaKnown RBP3.25□□□□□ -1.89
PTPN4-206ENST00000441089 OR10J3Q5JRS4 329 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 VSIG2Q96IQ7 327 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 SMIM2Q9BVW6 85 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 LAMTOR2Q9Y2Q5 125 aa3.25□□□□□ -1.89
PTPN4-206ENST00000441089 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 MUC2Q02817 5179 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 A0A096LNJ9 63 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 IGHV3-38A0A0C4DH36 116 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 A0A0J9YY99 117 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TRBV10-1A0A0K0K1A3 114 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TEX48A0A1B0GUV7 120 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TRBV6-4A0A1B0GX49 114 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 GAGE12JA6NER3 117 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 SDHAF1A6NFY7 115 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 LINC01546A6NGU7 62 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 C5orf52A6NGY3 159 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 F5H768 121 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TCAPO15273 167 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 CIDEAO60543 219 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TSHBP01222 138 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 ESDP10768 282 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 HTN3P15516 51 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 UBE2D3P61077 147 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 SNRPEP62304 92 aaKnown RBP3.24□□□□□ -1.89
PTPN4-206ENST00000441089 UBE2D2P62837 147 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 RPL32P62910 135 aaKnown RBP3.24□□□□□ -1.89
PTPN4-206ENST00000441089 GAGE1Q13065 139 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 GAGE4Q13068 117 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 GAGE5Q13069 117 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TTC32Q5I0X7 151 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 NIT1Q86X76 327 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 HIST3H2BBQ8N257 126 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 Q8N8P6 123 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 ZNRF2Q8NHG8 242 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 C20orf78Q9BR46 151 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TMEM70Q9BUB7 260 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 MAP1LC3AQ9H492 121 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 NIT2Q9NQR4 276 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 HHLA3Q9XRX5 114 aa3.24□□□□□ -1.89
PTPN4-206ENST00000441089 TRBV7-3A0A075B6L6 115 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 IGKV2D-30A0A075B6S6 120 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 TRAV26-1A0A087WT03 109 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 TRBV27A0A0K0K1C4 114 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 H7C1H1 209 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 PPP1R17O96001 155 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 LINC00614P0C842 121 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 RHOHQ15669 191 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 PMCHL1Q16048 86 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 PDZD11Q5EBL8 140 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 RNASEKQ6P5S7 137 aaKnown RBP3.23□□□□□ -1.89
PTPN4-206ENST00000441089 NTM-AS1Q6ZSK4 140 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 BAGE3Q86Y29 109 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 FAM19A2Q8N3H0 131 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 DNAJC30Q96LL9 226 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 PRADC1Q9BSG0 188 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 ST20Q9HBF5 79 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 PRO0255Q9UI72 69 aa3.23□□□□□ -1.89
PTPN4-206ENST00000441089 A0A096LPF7 62 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 IGHV1-24A0A0C4DH33 117 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 LOC105371267A0A1B0GV96 52 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 VCYO14598 125 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 PMCHP20382 165 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 KRTAP10-1P60331 282 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
PTPN4-206ENST00000441089 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 FA2HQ7L5A8 372 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 CHCHD1Q96BP2 118 aaKnown RBP3.22□□□□□ -1.89
PTPN4-206ENST00000441089 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 TM2D2Q9BX73 214 aa3.22□□□□□ -1.89
PTPN4-206ENST00000441089 NXT2Q9NPJ8 142 aaKnown RBP3.22□□□□□ -1.89
PTPN4-206ENST00000441089 I3L3M4 83 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 S100A6P06703 90 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 FCER1GP30273 86 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 AMTP48728 403 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 CCL18P55774 89 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 LAGE3Q14657 143 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 ATP6V0E2Q8NHE4 81 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 FAM104AQ969W3 186 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms