RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PYGO1Q9Y3Y4 419 aa8.75□□□□□ -1.01
LTBR-203ENST00000441074 IGHV3-16A0A0C4DH30 117 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 DUX5Q96PT3 197 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 MTORP42345 2549 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 FAM236AA0A1B0GUQ0 79 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 FAM236BA0A1B0GV22 79 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 IGHV4-59P01825 116 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 IGHG2P01859 326 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 IGHV4-31P0DP07 118 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 ID1P41134 155 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 DEFB112Q30KQ8 113 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 Q6ZSV7 163 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 C3orf56Q8N813 242 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 PPDPFQ9H3Y8 114 aa8.74□□□□□ -1.01
LTBR-203ENST00000441074 DAZ1Q9NQZ3 744 aaKnown RBP8.74□□□□□ -1.01
LTBR-203ENST00000441074 HIVEP1P15822 2718 aa8.73□□□□□ -1.01
LTBR-203ENST00000441074 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
LTBR-203ENST00000441074 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
LTBR-203ENST00000441074 TRAV12-3A0A0B4J271 114 aa8.73□□□□□ -1.01
LTBR-203ENST00000441074 RHPN1-AS1Q9BWJ2 59 aa8.73□□□□□ -1.01
LTBR-203ENST00000441074 TIMM17BO60830 172 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 IGKV3-7A0A075B6H7 116 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 CD28P10747 220 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 FAM104AQ969W3 186 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 VSIG2Q96IQ7 327 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
LTBR-203ENST00000441074 K7EMT4 169 aa8.71□□□□□ -1.01
LTBR-203ENST00000441074 LINC00643Q86TS7 51 aa8.71□□□□□ -1.01
LTBR-203ENST00000441074 DCANP1Q8TF63 244 aa8.71□□□□□ -1.01
LTBR-203ENST00000441074 PF4V1P10720 104 aa8.71□□□□□ -1.02
LTBR-203ENST00000441074 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 A6NDX4 124 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 NDUFA7O95182 113 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 IGHV3-11P01762 117 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 ATP5G1P05496 136 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 NPC2P61916 151 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 C9orf153Q5TBE3 101 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 CR1P17927 2039 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 UQCRQO14949 82 aa8.7□□□□□ -1.02
LTBR-203ENST00000441074 CEMP1Q6PRD7 247 aaPredicted RBP8.7□□□□□ -1.02
LTBR-203ENST00000441074 IGLV1-40P01703 118 aa8.69□□□□□ -1.02
LTBR-203ENST00000441074 LINC00694P0DN24 101 aa8.69□□□□□ -1.02
LTBR-203ENST00000441074 LINC00526Q96FQ7 95 aa8.69□□□□□ -1.02
LTBR-203ENST00000441074 NIPBLQ6KC79 2804 aaeCLIP8.69□□□□□ -1.02
LTBR-203ENST00000441074 HIST2H2BDQ6DRA6 164 aa8.69□□□□□ -1.02
LTBR-203ENST00000441074 SDIM1Q6ZPB5 146 aa8.69□□□□□ -1.02
LTBR-203ENST00000441074 SMCR5Q8TEV8 140 aa8.69□□□□□ -1.02
LTBR-203ENST00000441074 F8P00451 2351 aa8.68□□□□□ -1.02
LTBR-203ENST00000441074 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
LTBR-203ENST00000441074 EDA2RQ9HAV5 297 aa8.68□□□□□ -1.02
LTBR-203ENST00000441074 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
LTBR-203ENST00000441074 A8MZ25 164 aa8.67□□□□□ -1.02
LTBR-203ENST00000441074 COX7A2LO14548 114 aa8.67□□□□□ -1.02
LTBR-203ENST00000441074 CXCL5P42830 114 aa8.67□□□□□ -1.02
LTBR-203ENST00000441074 CFHR3Q02985 330 aa8.66□□□□□ -1.02
LTBR-203ENST00000441074 SMR3AQ99954 134 aa8.66□□□□□ -1.02
LTBR-203ENST00000441074 HERVK_113P63121 156 aa8.66□□□□□ -1.02
LTBR-203ENST00000441074 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
LTBR-203ENST00000441074 PEMTQ9UBM1 199 aa8.66□□□□□ -1.02
LTBR-203ENST00000441074 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
LTBR-203ENST00000441074 TEP1Q99973 2627 aaKnown RBP8.66□□□□□ -1.02
LTBR-203ENST00000441074 NDUFA1O15239 70 aa8.65□□□□□ -1.02
LTBR-203ENST00000441074 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
LTBR-203ENST00000441074 TRAV12-2A0A075B6T6 113 aa8.65□□□□□ -1.03
LTBR-203ENST00000441074 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.03
LTBR-203ENST00000441074 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.03
LTBR-203ENST00000441074 A0A1B0GX51 115 aa8.64□□□□□ -1.03
LTBR-203ENST00000441074 DAND5Q8N907 189 aa8.64□□□□□ -1.03
LTBR-203ENST00000441074 TRACP01848 142 aa8.64□□□□□ -1.03
LTBR-203ENST00000441074 COX7CP15954 63 aa8.64□□□□□ -1.03
LTBR-203ENST00000441074 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
LTBR-203ENST00000441074 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
LTBR-203ENST00000441074 LINC00308Q8TCZ7 52 aa8.64□□□□□ -1.03
LTBR-203ENST00000441074 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
LTBR-203ENST00000441074 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
LTBR-203ENST00000441074 TMEM89A2RUT3 159 aa8.63□□□□□ -1.03
LTBR-203ENST00000441074 J3KT08 172 aa8.63□□□□□ -1.03
LTBR-203ENST00000441074 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
LTBR-203ENST00000441074 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
LTBR-203ENST00000441074 HIVEP2P31629 2446 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 J3QLI3 93 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 IGKV3-20P01619 116 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 BAALC-AS2P0C853 105 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 TIRAPP58753 221 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 KRTAP1-1Q07627 177 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 LY6G6DO95868 133 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 FSHBP01225 129 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 EDN2P20800 178 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 PSMB8P28062 276 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 C5orf47Q569G3 176 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 FAM222AQ5U5X8 452 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
LTBR-203ENST00000441074 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
LTBR-203ENST00000441074 K7EQG2 157 aa8.61□□□□□ -1.03
LTBR-203ENST00000441074 CRYGAP11844 174 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms