RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 NHLRC4P0CG21 123 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 GAGE2BQ13066 116 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 Q6Q795 121 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 SORL1Q92673 2214 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 COX6CP09669 75 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 GAGE5Q13069 117 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 GAGE6Q13070 117 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 DEFB112Q30KQ8 113 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP4-202ENST00000439510 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
CDC42EP4-202ENST00000439510 Q9UF83 564 aa11.09□□□□□ -0.63
CDC42EP4-202ENST00000439510 KNCNA6PVL3 124 aa11.08□□□□□ -0.64
CDC42EP4-202ENST00000439510 A8MZ25 164 aa11.08□□□□□ -0.64
CDC42EP4-202ENST00000439510 Q6ZSN1 163 aa11.08□□□□□ -0.64
CDC42EP4-202ENST00000439510 IFITM1P13164 125 aa11.08□□□□□ -0.64
CDC42EP4-202ENST00000439510 HTN1P15515 57 aa11.08□□□□□ -0.64
CDC42EP4-202ENST00000439510 DUX5Q96PT3 197 aa11.08□□□□□ -0.64
CDC42EP4-202ENST00000439510 LST1O00453 97 aa11.07□□□□□ -0.64
CDC42EP4-202ENST00000439510 NDUFV3P56181 108 aaKnown RBP11.07□□□□□ -0.64
CDC42EP4-202ENST00000439510 Q6ZSV7 163 aa11.07□□□□□ -0.64
CDC42EP4-202ENST00000439510 Q96MF0 132 aa11.07□□□□□ -0.64
CDC42EP4-202ENST00000439510 CUBNO60494 3623 aa11.07□□□□□ -0.64
CDC42EP4-202ENST00000439510 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 ZNF415Q09FC8 603 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 DUX3Q96PT4 197 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 NDUFA1O15239 70 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 DEFB121Q5J5C9 76 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 DNAJC30Q96LL9 226 aa11.06□□□□□ -0.64
CDC42EP4-202ENST00000439510 DEFB131AP59861 70 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 NPC2P61916 151 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 FAM240AA0A1B0GVK7 77 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 PRM2P04554 102 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 TIRAPP58753 221 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 WFDC11Q8NEX6 87 aa11.05□□□□□ -0.64
CDC42EP4-202ENST00000439510 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
CDC42EP4-202ENST00000439510 A0A096LNT2 108 aa11.04□□□□□ -0.64
CDC42EP4-202ENST00000439510 DSCR9P59020 149 aa11.04□□□□□ -0.64
CDC42EP4-202ENST00000439510 KRTAP1-3Q8IUG1 177 aa11.04□□□□□ -0.64
CDC42EP4-202ENST00000439510 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
CDC42EP4-202ENST00000439510 C11orf72Q8NBR9 251 aa11.03□□□□□ -0.64
CDC42EP4-202ENST00000439510 BEAN1Q3B7T3 259 aa11.02□□□□□ -0.64
CDC42EP4-202ENST00000439510 TMEM101Q96IK0 257 aa11.02□□□□□ -0.64
CDC42EP4-202ENST00000439510 TTC32Q5I0X7 151 aa11.02□□□□□ -0.65
CDC42EP4-202ENST00000439510 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
CDC42EP4-202ENST00000439510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
CDC42EP4-202ENST00000439510 OTOGQ6ZRI0 2925 aa11.01□□□□□ -0.65
CDC42EP4-202ENST00000439510 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
CDC42EP4-202ENST00000439510 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
CDC42EP4-202ENST00000439510 DAND5Q8N907 189 aa11.01□□□□□ -0.65
CDC42EP4-202ENST00000439510 LINC01356Q8N9X3 169 aa11.01□□□□□ -0.65
CDC42EP4-202ENST00000439510 MTORP42345 2549 aa11□□□□□ -0.65
CDC42EP4-202ENST00000439510 RS1O15537 224 aa11□□□□□ -0.65
CDC42EP4-202ENST00000439510 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
CDC42EP4-202ENST00000439510 SLURP1P55000 103 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 SETXQ7Z333 2677 aaKnown RBP10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 J3QLI3 93 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 LRRC75A-AS1Q8N1F1 130 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 LINC00308Q8TCZ7 52 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 IGHV3OR16-12A0A075B7B8 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 GAGE7O76087 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 COX6A2Q02221 97 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 GAGE4Q13068 117 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
CDC42EP4-202ENST00000439510 HERVK_113P63121 156 aa10.98□□□□□ -0.65
CDC42EP4-202ENST00000439510 IGHV4-31P0DP07 118 aa10.98□□□□□ -0.65
CDC42EP4-202ENST00000439510 LINC01587Q99440 93 aa10.98□□□□□ -0.65
CDC42EP4-202ENST00000439510 NF1P21359 2839 aa10.97□□□□□ -0.65
CDC42EP4-202ENST00000439510 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
CDC42EP4-202ENST00000439510 Q9H8V8 135 aa10.97□□□□□ -0.65
CDC42EP4-202ENST00000439510 MAP6D1Q9H9H5 199 aa10.97□□□□□ -0.65
CDC42EP4-202ENST00000439510 DEFB136Q30KP8 78 aa10.97□□□□□ -0.65
CDC42EP4-202ENST00000439510 Q6YL49 198 aa10.97□□□□□ -0.65
CDC42EP4-202ENST00000439510 CCDC179H3BU77 68 aa10.96□□□□□ -0.65
CDC42EP4-202ENST00000439510 WIPF1O43516 503 aa10.96□□□□□ -0.65
CDC42EP4-202ENST00000439510 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
CDC42EP4-202ENST00000439510 C18orf65Q6ZTR6 163 aa10.96□□□□□ -0.65
CDC42EP4-202ENST00000439510 INSP01308 110 aa10.96□□□□□ -0.66
CDC42EP4-202ENST00000439510 BAHCC1Q9P281 2608 aa10.96□□□□□ -0.66
CDC42EP4-202ENST00000439510 COX7A2LO14548 114 aa10.95□□□□□ -0.66
CDC42EP4-202ENST00000439510 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
CDC42EP4-202ENST00000439510 TRBV7-7A0A0K0K1E9 115 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms