RNA–Protein interactions for RNA: ENST00000438416.2

AP000943.1-201, humanhuman

TSL 3 BASIC

Gene AP000943.1, Length 712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.1-201ENST00000438416 NIT2Q9NQR4 276 aa2.77□□□□□ -1.97
AP000943.1-201ENST00000438416 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
AP000943.1-201ENST00000438416 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 TRAV1-1A0A0B4J248 108 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 TRAV26-2A0A0B4J265 109 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 RAB19A4D1S5 217 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 K7EN84 100 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 GAS8-AS1O95177 125 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 MGPP08493 103 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 NTF3P20783 257 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 CTRLP40313 264 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 RPS10P46783 165 aaKnown RBP2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 FOXA3P55318 350 aaPredicted RBP2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 MAJINQ3KP22 176 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 CENPWQ5EE01 88 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 LYZL1Q6UWQ5 148 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 C9orf62Q8N4C0 152 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 STPG4Q8N801 248 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 FAM213BQ8TBF2 198 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 CHCHD10Q8WYQ3 142 aaPredicted RBP2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 DPH3P1Q9H4G8 78 aa2.76□□□□□ -1.97
AP000943.1-201ENST00000438416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 IGKV2-29A2NJV5 120 aaPredicted RBP2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 HMSDA8MTL9 139 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 UMAD1C9J7I0 102 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 H7C1H1 209 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 ESDP10768 282 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 CACNG7P62955 275 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 RPL24P83731 157 aaKnown RBP2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 SPINK6Q6UWN8 80 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 OR2D3Q8NGH3 330 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 GTSF1Q8WW33 167 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 FAM104AQ969W3 186 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 RPL39LQ96EH5 51 aaKnown RBP2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 LINC00526Q96FQ7 95 aa2.75□□□□□ -1.97
AP000943.1-201ENST00000438416 LINC00959A0A1B0GUT2 108 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 F2Z2F3 143 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 BCL2L11O43521 198 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 TSHBP01222 138 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 SMIM17P0DL12 118 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 FGF6P10767 208 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 RPS20P60866 119 aaKnown RBP2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 GAGE2BQ13066 116 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 COTL1Q14019 142 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 GAGE2EQ4V326 116 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 GAGE2AQ6NT46 116 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 KRTAP11-1Q8IUC1 163 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 LYPD6BQ8NI32 183 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 C7orf33Q8WU49 177 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 SMIM12Q96EX1 92 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 TPPP3Q9BW30 176 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 MANBALQ9NQG1 85 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 GAGE2DQ9UEU5 116 aa2.74□□□□□ -1.97
AP000943.1-201ENST00000438416 IGKV3OR2-268A0A0C4DH90 116 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 TRBV6-5A0A0K0K1A5 114 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 SDHAF1A6NFY7 115 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 H7C423 109 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 CCL25O15444 150 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 PFDN1O60925 122 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 NCR2O95944 276 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 TRGC1P0CF51 173 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 CAMPP49913 170 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 SULT1A2P50226 295 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 POLR2KP53803 58 aaKnown RBP2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 MEF2BQ02080 365 aaPredicted RBP2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 KRTAP7-1Q8IUC3 87 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 OR5A1Q8NGJ0 315 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 OCC1Q8TAD7 63 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 DPH3Q96FX2 82 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 RNASE7Q9H1E1 156 aaKnown RBP2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 CDC42SE2Q9NRR3 84 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 GNG13Q9P2W3 67 aa2.73□□□□□ -1.97
AP000943.1-201ENST00000438416 IGHV1-58A0A0C4DH39 117 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 UBE2L6O14933 153 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 IFNA1P01562 189 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 KRTAP1-4P0C5Y4 121 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 BCL2P10415 239 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 GNG4P50150 75 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 KRTAP10-6P60371 365 aaPredicted RBP2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 Q6ZRP5 223 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 MRPL52Q86TS9 123 aaKnown RBP2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 BATF3Q9NR55 127 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
AP000943.1-201ENST00000438416 IGLV4-69A0A075B6H9 119 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 IGLV5-45A0A087WSX0 123 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 TRBV27A0A0K0K1C4 114 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 I3L3M4 83 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 PDE6DO43924 150 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 APCSP02743 223 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 ZNF25P17030 456 aaPredicted RBP2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 XCL1P47992 114 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 SYCNQ0VAF6 134 aa2.71□□□□□ -1.98
AP000943.1-201ENST00000438416 RGS21Q2M5E4 152 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms