RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 RPL39P62891 51 aaKnown RBP4.51□□□□□ -1.69
MCF2-205ENST00000437564 RPS21P63220 83 aaKnown RBP4.51□□□□□ -1.69
MCF2-205ENST00000437564 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 HIGD2AQ9BW72 106 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 DEFB126Q9BYW3 111 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 PRR14LQ5THK1 2151 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 PDE4DIPQ5VU43 2346 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 IGKV3D-11A0A0A0MRZ8 115 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 LECT2O14960 151 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 LMO4P61968 165 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 Q6ZQT0 140 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 IGLV4-3A0A075B6K6 122 aa4.5□□□□□ -1.69
MCF2-205ENST00000437564 NANOS2P60321 138 aaKnown RBP4.5□□□□□ -1.69
MCF2-205ENST00000437564 BSPH1Q075Z2 132 aa4.5□□□□□ -1.69
MCF2-205ENST00000437564 PRSS33Q8NF86 280 aa4.5□□□□□ -1.69
MCF2-205ENST00000437564 FDCSPQ8NFU4 85 aa4.5□□□□□ -1.69
MCF2-205ENST00000437564 ZCCHC13Q8WW36 166 aaKnown RBP4.5□□□□□ -1.69
MCF2-205ENST00000437564 PI4KAP42356 2102 aa4.5□□□□□ -1.69
MCF2-205ENST00000437564 C9orf66Q5T8R8 295 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 ATP1A1-AS1Q5TC04 95 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 ZNF702PQ9H963 129 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 ZFHX3Q15911 3703 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 MGPP08493 103 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 C20orf203Q8NBC4 194 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
MCF2-205ENST00000437564 LENEPQ9Y5L5 61 aa4.49□□□□□ -1.69
MCF2-205ENST00000437564 IGHV3-16A0A0C4DH30 117 aa4.48□□□□□ -1.69
MCF2-205ENST00000437564 RPL36AP83881 106 aaKnown RBP4.48□□□□□ -1.69
MCF2-205ENST00000437564 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
MCF2-205ENST00000437564 Q8TAT8 98 aa4.48□□□□□ -1.69
MCF2-205ENST00000437564 SMIM11BQ8TCY0 68 aa4.48□□□□□ -1.69
MCF2-205ENST00000437564 RPL36ALQ969Q0 106 aaKnown RBP4.48□□□□□ -1.69
MCF2-205ENST00000437564 ZNF580Q9UK33 172 aa4.48□□□□□ -1.69
MCF2-205ENST00000437564 DEFB114Q30KQ6 69 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 S4R3C0 116 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 IGLV5-45A0A087WSX0 123 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 B9D2Q9BPU9 175 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 KLK9Q9UKQ9 250 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 DOCK10Q96BY6 2186 aa4.47□□□□□ -1.69
MCF2-205ENST00000437564 IGHV3-48P01763 117 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 IGHV4-31P0DP07 118 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 IGFL4Q6B9Z1 124 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 Q6ZTI0 123 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 Q8N814 137 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 C11orf21Q9P2W6 132 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 RTTNQ86VV8 2226 aa4.46□□□□□ -1.7
MCF2-205ENST00000437564 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 IGKV1-17P01599 117 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 IGLV1-51P01701 117 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 C11orf71Q6IPW1 123 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 IGHV3-38A0A0C4DH36 116 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 CGB3P0DN86 165 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 CGB7P0DN87 165 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
MCF2-205ENST00000437564 NTM-AS1Q6ZSK4 140 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 LEAP2Q969E1 77 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 DNAJC13O75165 2243 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 IGHV3-49A0A0A0MS15 119 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 B4DSR2 109 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 I3L2K1 104 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 LY6G6DO95868 133 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 TFF1P04155 84 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 LINC00315P59091 139 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 C9orf47Q6ZRZ4 202 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 ZNF843Q8N446 348 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
MCF2-205ENST00000437564 IGHV3OR16-13A0A075B7E8 117 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 IGHV3-73A0A0B4J1V6 119 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 FSHBP01225 129 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 SUMO4Q6EEV6 95 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 SND1-IT1Q9HBX3 110 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
MCF2-205ENST00000437564 SLPIP03973 132 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 MUC4Q99102 2169 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 IGKV2-28A0A075B6P5 120 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 IGHV3-72A0A0B4J1Y9 119 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 IGKV2D-28P01615 120 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 CD52P31358 61 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 C17orf58Q2M2W7 97 aa4.42□□□□□ -1.7
MCF2-205ENST00000437564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
MCF2-205ENST00000437564 IGHV3-15A0A0B4J1V0 119 aa4.41□□□□□ -1.7
MCF2-205ENST00000437564 DEFB110Q30KQ9 67 aa4.41□□□□□ -1.7
MCF2-205ENST00000437564 LINC00467Q9BRT7 94 aa4.41□□□□□ -1.7
MCF2-205ENST00000437564 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
MCF2-205ENST00000437564 SDK2Q58EX2 2172 aa4.41□□□□□ -1.7
MCF2-205ENST00000437564 TNCP24821 2201 aa4.41□□□□□ -1.7
MCF2-205ENST00000437564 IGLV2-23P01705 113 aa4.4□□□□□ -1.7
MCF2-205ENST00000437564 CNBPP62633 177 aaKnown RBP4.4□□□□□ -1.7
MCF2-205ENST00000437564 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.7
MCF2-205ENST00000437564 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.71
MCF2-205ENST00000437564 RTL8CO15255 209 aa4.4□□□□□ -1.71
MCF2-205ENST00000437564 CCL5P13501 91 aa4.4□□□□□ -1.71
MCF2-205ENST00000437564 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms