RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 Q6ZSV7 163 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 NAV3Q8IVL0 2385 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 A6NED7 52 aa8.4□□□□□ -1.06
SCN4A-201ENST00000435607 SPRY4Q9C004 299 aa8.4□□□□□ -1.06
SCN4A-201ENST00000435607 CD164L2Q6UWJ8 174 aa8.4□□□□□ -1.06
SCN4A-201ENST00000435607 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.06
SCN4A-201ENST00000435607 MUC7Q8TAX7 377 aa8.4□□□□□ -1.07
SCN4A-201ENST00000435607 C10orf91Q5T1B1 145 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 ARHGAP32A7KAX9 2087 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
SCN4A-201ENST00000435607 DEFB1P60022 68 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 C3orf84H3BNL1 204 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 FXYD2P54710 66 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 KRTAP27-1Q3LI81 207 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 CIRBP-AS1Q8TBR5 109 aa8.39□□□□□ -1.07
SCN4A-201ENST00000435607 TECTAO75443 2155 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 COX17Q14061 63 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 C20orf197Q8N268 126 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 ANKHD1Q8IWZ3 2542 aaKnown RBP8.38□□□□□ -1.07
SCN4A-201ENST00000435607 TET2Q6N021 2002 aaPredicted RBP8.38□□□□□ -1.07
SCN4A-201ENST00000435607 LYPD6Q86Y78 171 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 SCXQ7RTU7 201 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
SCN4A-201ENST00000435607 ZNF106Q9H2Y7 1883 aaKnown RBP8.37□□□□□ -1.07
SCN4A-201ENST00000435607 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 Q8NA96 180 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 CFAP126Q5VTH2 177 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 CCDC140Q96MF4 163 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 BBC3Q96PG8 261 aaPredicted RBP8.37□□□□□ -1.07
SCN4A-201ENST00000435607 IGHV4-30-4P0DP06 118 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 MLST8Q9BVC4 326 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
SCN4A-201ENST00000435607 WFDC2Q14508 124 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 C6orf99Q4VX62 202 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 PSMG3-AS1Q96PY0 264 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 X6R8D5 127 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 WFDC13Q8IUB5 93 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 FSTL3O95633 263 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 RETNQ9HD89 108 aa8.36□□□□□ -1.07
SCN4A-201ENST00000435607 CDPF1Q6NVV7 123 aa8.35□□□□□ -1.07
SCN4A-201ENST00000435607 LST1O00453 97 aa8.35□□□□□ -1.07
SCN4A-201ENST00000435607 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
SCN4A-201ENST00000435607 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
SCN4A-201ENST00000435607 UQCRQO14949 82 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 NANOS2P60321 138 aaKnown RBP8.34□□□□□ -1.07
SCN4A-201ENST00000435607 RBX1P62877 108 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 SDIM1Q6ZPB5 146 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 PLA2G2AP14555 144 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
SCN4A-201ENST00000435607 C19orf84I3L1E1 186 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 TTC28Q96AY4 2481 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 Q6ZSR3 168 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 LINC00173Q6ZV60 143 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 LINC01006Q8NI28 216 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 EXPH5Q8NEV8 1989 aa8.33□□□□□ -1.08
SCN4A-201ENST00000435607 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 U3KQK5 164 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 M0QXV9 152 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 SLPIP03973 132 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 IGLC6P0CF74 106 aa8.32□□□□□ -1.08
SCN4A-201ENST00000435607 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
SCN4A-201ENST00000435607 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.31□□□□□ -1.08
SCN4A-201ENST00000435607 EML5Q05BV3 1969 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 MRGPRG-AS1Q2M3A8 158 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 ESRGQ1W209 222 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 ZNF524Q96C55 264 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 ATG2AQ2TAZ0 1938 aa8.31□□□□□ -1.08
SCN4A-201ENST00000435607 TIMM17BO60830 172 aa8.3□□□□□ -1.08
SCN4A-201ENST00000435607 NDUFA7O95182 113 aa8.3□□□□□ -1.08
SCN4A-201ENST00000435607 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
SCN4A-201ENST00000435607 E7EUB6 86 aa8.3□□□□□ -1.08
SCN4A-201ENST00000435607 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
SCN4A-201ENST00000435607 TRBV30A0A0K0K1B3 111 aa8.29□□□□□ -1.08
SCN4A-201ENST00000435607 Q6ZQY7 126 aa8.29□□□□□ -1.08
SCN4A-201ENST00000435607 NUP210LQ5VU65 1888 aa8.29□□□□□ -1.08
SCN4A-201ENST00000435607 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
SCN4A-201ENST00000435607 PYGO1Q9Y3Y4 419 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 M0QY20 66 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
SCN4A-201ENST00000435607 ZNF702PQ9H963 129 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 Q6JHZ5 121 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 LOC100131303A0A0U1RQF7 123 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 LINC00959A0A1B0GUT2 108 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 OXLD1Q5BKU9 147 aa8.28□□□□□ -1.08
SCN4A-201ENST00000435607 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
SCN4A-201ENST00000435607 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms