RNA–Protein interactions for RNA: ENST00000435539.1

AL441943.1-201, humanhuman

TSL 3 BASIC

Gene AL441943.1, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.1-201ENST00000435539 HIST1H2BCP62807 126 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 HIST2H2BEQ16778 126 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 COA6Q5JTJ3 125 aaKnown RBP5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 HIST1H2BHQ93079 126 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 TMEM101Q96IK0 257 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 PACRGQ96M98 296 aaPredicted RBP5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 HIST1H2BNQ99877 126 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 HIST1H2BMQ99879 126 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 UPK3BQ9BT76 320 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 APLNQ9ULZ1 77 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 CYSLTR1Q9Y271 337 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 CSDC2Q9Y534 153 aaKnown RBP5.73□□□□□ -1.49
AL441943.1-201ENST00000435539 A0A087WX48 190 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 A0A1B0GUV1 79 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 GAS8-AS1O95177 125 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 ESDP10768 282 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 TIMM21Q9BVV7 248 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 MRPS16Q9Y3D3 137 aaKnown RBP5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 PYGO1Q9Y3Y4 419 aa5.72□□□□□ -1.49
AL441943.1-201ENST00000435539 TENM3Q9P273 2699 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 IGHV3-38A0A0C4DH36 116 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 TMEM262E9PQX1 116 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 CCL25O15444 150 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 ATP5LO75964 103 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 TSHBP01222 138 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 HBDP02042 147 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 AKR1D1P51857 326 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 ESRGQ1W209 222 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 CASC10Q5T4H9 136 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 LGALS9CQ6DKI2 356 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 MRPL52Q86TS9 123 aaKnown RBP5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 UBE2DNLQ8IWF7 75 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 C10orf126Q8N4M7 172 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 C20orf203Q8NBC4 194 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 TMEM141Q96I45 108 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 CHCHD5Q9BSY4 110 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 SPANXA1Q9NS26 97 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
AL441943.1-201ENST00000435539 S100A2P29034 98 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 NDUFA6P56556 154 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 C2orf66Q6UXQ4 117 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 Q6ZN92 141 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 ERASQ7Z444 233 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 TIMM17AQ99595 171 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 Q9UF83 564 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 STAB2Q8WWQ8 2551 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 NACAE9PAV3 2078 aa5.7□□□□□ -1.5
AL441943.1-201ENST00000435539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 SIVA1O15304 175 aa5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 LEPROTL1O95214 131 aa5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 MRPS36P82909 103 aaKnown RBP5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 TTC32Q5I0X7 151 aa5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 LINC01556Q5JQF7 62 aa5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 ZFAND6Q6FIF0 208 aa5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 NTM-AS1Q6ZSK4 140 aa5.69□□□□□ -1.5
AL441943.1-201ENST00000435539 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 SERF1AO75920 110 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 FGF6P10767 208 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 SEC11AP67812 179 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 OR5A1Q8NGJ0 315 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 Q9H8V8 135 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 LINC00588Q9Y4M8 146 aa5.68□□□□□ -1.5
AL441943.1-201ENST00000435539 C2orf88Q9BSF0 95 aa5.67□□□□□ -1.5
AL441943.1-201ENST00000435539 MAP1LC3CQ9BXW4 147 aa5.67□□□□□ -1.5
AL441943.1-201ENST00000435539 VCX2Q9H322 139 aa5.67□□□□□ -1.5
AL441943.1-201ENST00000435539 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
AL441943.1-201ENST00000435539 TRAV8-3A0A0A6YYJ7 113 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 TRAV8-4A0A0B4J246 113 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 GAGE6Q13070 117 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 PDZD11Q5EBL8 140 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 ZNF664Q8N3J9 261 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 RMI2Q96E14 147 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 CDC42SE2Q9NRR3 84 aa5.66□□□□□ -1.5
AL441943.1-201ENST00000435539 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 C5orf52A6NGY3 159 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 IGIPA6NJ69 53 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 CRPP02741 224 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 RBX1P62877 108 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 NFE4Q86UQ8 179 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
AL441943.1-201ENST00000435539 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
AL441943.1-201ENST00000435539 PRSS1P07477 247 aa5.64□□□□□ -1.51
AL441943.1-201ENST00000435539 SNRPEP62304 92 aaKnown RBP5.64□□□□□ -1.51
AL441943.1-201ENST00000435539 RPL39P62891 51 aaKnown RBP5.64□□□□□ -1.51
AL441943.1-201ENST00000435539 PMVKQ15126 192 aa5.64□□□□□ -1.51
AL441943.1-201ENST00000435539 SS18Q15532 418 aa5.64□□□□□ -1.51
AL441943.1-201ENST00000435539 MIAQ16674 131 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms