RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 NDUFA1O15239 70 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 SCGB1A1P11684 91 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 FOXI1Q12951 378 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 CIRBPQ14011 172 aaKnown RBP7.47□□□□□ -1.21
CD44-210ENST00000434472 Q1RN00 199 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 Q6ZTI0 123 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 GTSF1LQ9H1H1 148 aa7.47□□□□□ -1.21
CD44-210ENST00000434472 TRBV30A0A0K0K1B3 111 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 H7C423 109 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 PRSS2P07478 247 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 ATXN8Q156A1 80 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 TEN1Q86WV5 123 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 MTURNQ8N3F0 131 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 COPS9Q8WXC6 57 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 OVOL2Q9BRP0 275 aa7.46□□□□□ -1.21
CD44-210ENST00000434472 BAHCC1Q9P281 2608 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 ADARB2-AS1A8MUL3 147 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
CD44-210ENST00000434472 HILS1P60008 231 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 NOP10Q9NPE3 64 aaKnown RBP7.45□□□□□ -1.22
CD44-210ENST00000434472 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 TRBV6-4A0A1B0GX49 114 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 GAGE12JA6NER3 117 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 UBE2L6O14933 153 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 GAGE4Q13068 117 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 GAGE5Q13069 117 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 TMEM243Q9BU79 118 aa7.45□□□□□ -1.22
CD44-210ENST00000434472 MAP1AP78559 2803 aaPredicted RBP7.44□□□□□ -1.22
CD44-210ENST00000434472 TRGV2A0A075B6R0 118 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 J3QKU1 62 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
CD44-210ENST00000434472 COX6CP09669 75 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 ZFYVE26Q68DK2 2539 aa7.44□□□□□ -1.22
CD44-210ENST00000434472 H7C2G1 150 aa7.43□□□□□ -1.22
CD44-210ENST00000434472 SLC25A20O43772 301 aa7.43□□□□□ -1.22
CD44-210ENST00000434472 RPL35AP18077 110 aaKnown RBP7.43□□□□□ -1.22
CD44-210ENST00000434472 LINC01600Q96MT4 127 aa7.43□□□□□ -1.22
CD44-210ENST00000434472 ZANQ9Y493 2812 aa7.43□□□□□ -1.22
CD44-210ENST00000434472 MXRA5Q9NR99 2828 aa7.43□□□□□ -1.22
CD44-210ENST00000434472 ZFHX3Q15911 3703 aa7.43□□□□□ -1.22
CD44-210ENST00000434472 CRYBG3Q68DQ2 2970 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 PLAC8L1A1L4L8 177 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 GAGE7O76087 117 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 HERV-K104P63124 156 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 COX6A2Q02221 97 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 CSNK1G2-AS1Q8NCQ2 148 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
CD44-210ENST00000434472 TRGV4A0A0C4DH28 118 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 A8MZ25 164 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 C9JAW5 83 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 PLA2G2AP14555 144 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 INSL3P51460 131 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 LINC01620Q4KN68 170 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 HIST2H2BCQ6DN03 193 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 PPDPFQ9H3Y8 114 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 ABCA12Q86UK0 2595 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 TRIAP1O43715 76 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 ANKRD29Q8N6D5 301 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 Q9H8V8 135 aa7.41□□□□□ -1.22
CD44-210ENST00000434472 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.22
CD44-210ENST00000434472 TMEM262E9PQX1 116 aa7.4□□□□□ -1.22
CD44-210ENST00000434472 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.4□□□□□ -1.22
CD44-210ENST00000434472 TRBV10-2A0A0K0K1G8 114 aa7.39□□□□□ -1.23
CD44-210ENST00000434472 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
CD44-210ENST00000434472 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
CD44-210ENST00000434472 MYO9AB2RTY4 2548 aa7.39□□□□□ -1.23
CD44-210ENST00000434472 F5H768 121 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 PF4P02776 101 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 RPL13AP40429 203 aaKnown RBP7.38□□□□□ -1.23
CD44-210ENST00000434472 FHL2Q14192 279 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 KIR2DL5BQ8NHK3 375 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 ZNF625Q96I27 306 aaPredicted RBP7.38□□□□□ -1.23
CD44-210ENST00000434472 CENPEQ02224 2701 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 NPC2P61916 151 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 MEIG1Q5JSS6 88 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 PRIMA1Q86XR5 153 aa7.38□□□□□ -1.23
CD44-210ENST00000434472 APCP25054 2843 aa7.37□□□□□ -1.23
CD44-210ENST00000434472 SMIM9A6NGZ8 99 aa7.37□□□□□ -1.23
CD44-210ENST00000434472 H3BT86 120 aa7.37□□□□□ -1.23
CD44-210ENST00000434472 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
CD44-210ENST00000434472 LOC100131303A0A0U1RQF7 123 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms