RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 SPRR1BP22528 89 aa-1.27□□□□□ -2.61
LINC01239-201ENST00000433645 KCNRGQ8N5I3 272 aa-1.27□□□□□ -2.61
LINC01239-201ENST00000433645 AQP10Q96PS8 301 aa-1.27□□□□□ -2.61
LINC01239-201ENST00000433645 KIF21AQ7Z4S6 1674 aa-1.28□□□□□ -2.61
LINC01239-201ENST00000433645 PIGBOS1A0A0B4J2F0 54 aa-1.28□□□□□ -2.61
LINC01239-201ENST00000433645 K7ERU9 68 aa-1.28□□□□□ -2.61
LINC01239-201ENST00000433645 DEFB123Q8N688 67 aa-1.28□□□□□ -2.61
LINC01239-201ENST00000433645 LINC00472Q9H8W2 130 aa-1.28□□□□□ -2.61
LINC01239-201ENST00000433645 TRAV13-2A0A0B4J235 113 aa-1.29□□□□□ -2.62
LINC01239-201ENST00000433645 TMEM170BQ5T4T1 132 aa-1.29□□□□□ -2.62
LINC01239-201ENST00000433645 Q6JHZ5 121 aa-1.29□□□□□ -2.62
LINC01239-201ENST00000433645 V9GYH0 126 aa-1.29□□□□□ -2.62
LINC01239-201ENST00000433645 SVEP1Q4LDE5 3571 aa-1.3□□□□□ -2.62
LINC01239-201ENST00000433645 KRTAP19-8Q3LI54 63 aa-1.3□□□□□ -2.62
LINC01239-201ENST00000433645 C10orf128Q5T292 105 aa-1.3□□□□□ -2.62
LINC01239-201ENST00000433645 TCEAL4Q96EI5 215 aa-1.3□□□□□ -2.62
LINC01239-201ENST00000433645 TMEM191AQ9H0A3 160 aa-1.3□□□□□ -2.62
LINC01239-201ENST00000433645 MYOM3Q5VTT5 1437 aa-1.31□□□□□ -2.62
LINC01239-201ENST00000433645 FAT1Q14517 4588 aa-1.31□□□□□ -2.62
LINC01239-201ENST00000433645 SETD2Q9BYW2 2564 aaPredicted RBP-1.31□□□□□ -2.62
LINC01239-201ENST00000433645 SPINK4O60575 86 aa-1.31□□□□□ -2.62
LINC01239-201ENST00000433645 PPIP5K1Q6PFW1 1433 aa-1.32□□□□□ -2.62
LINC01239-201ENST00000433645 CEP152O94986 1710 aa-1.32□□□□□ -2.62
LINC01239-201ENST00000433645 KDM5AP29375 1690 aaKnown RBP-1.32□□□□□ -2.62
LINC01239-201ENST00000433645 ARAP2Q8WZ64 1704 aa-1.32□□□□□ -2.62
LINC01239-201ENST00000433645 ANKRD30AQ9BXX3 1397 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 UQCR11O14957 56 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 TPPP2P59282 170 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 C12orf73Q69YU5 71 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 Q6AWC8 147 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 CCDC167Q9P0B6 97 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 IQSEC2Q5JU85 1478 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 RIMS1Q86UR5 1692 aaKnown RBP-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 PCNX1Q96RV3 2341 aa-1.33□□□□□ -2.62
LINC01239-201ENST00000433645 GAPVD1Q14C86 1478 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 M0R2T5 61 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 TNFP01375 233 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 COPZ1P61923 177 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 RPS25P62851 125 aaKnown RBP-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 SMCO1Q147U7 214 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 BAGE2Q86Y30 109 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 TTC9CQ8N5M4 171 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 MAFIPQ8WZ33 124 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 COPZ2Q9P299 210 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 RAPGEF6Q8TEU7 1601 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 LAMA5O15230 3695 aa-1.34□□□□□ -2.62
LINC01239-201ENST00000433645 SHANK2Q9UPX8 1470 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 MXRA5Q9NR99 2828 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 ARPC5O15511 151 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 APOC3P02656 99 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 SPRR2AP35326 72 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 LZICQ8WZA0 190 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 DPH3Q96FX2 82 aa-1.35□□□□□ -2.63
LINC01239-201ENST00000433645 TSTD1Q8NFU3 115 aa-1.36□□□□□ -2.63
LINC01239-201ENST00000433645 TPT1P8Q9HAU6 139 aa-1.36□□□□□ -2.63
LINC01239-201ENST00000433645 GRIN2AQ12879 1464 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 BICRAQ9NZM4 1560 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 F8VRH5 84 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 AKAP14Q86UN6 197 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 COPS9Q8WXC6 57 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 NDUFA4L2Q9NRX3 87 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 HERC2O95714 4834 aa-1.37□□□□□ -2.63
LINC01239-201ENST00000433645 RBM3P98179 157 aaKnown RBP-1.38□□□□□ -2.63
LINC01239-201ENST00000433645 Q8N8P6 123 aa-1.38□□□□□ -2.63
LINC01239-201ENST00000433645 CFTRP13569 1480 aa-1.38□□□□□ -2.63
LINC01239-201ENST00000433645 PCLOQ9Y6V0 5065 aa-1.39□□□□□ -2.63
LINC01239-201ENST00000433645 TULP4Q9NRJ4 1543 aa-1.39□□□□□ -2.63
LINC01239-201ENST00000433645 DR1Q01658 176 aa-1.39□□□□□ -2.63
LINC01239-201ENST00000433645 ANP32BQ92688 251 aaKnown RBP-1.39□□□□□ -2.63
LINC01239-201ENST00000433645 MGST2Q99735 147 aa-1.39□□□□□ -2.63
LINC01239-201ENST00000433645 LINC01558Q9Y6Z2 57 aa-1.39□□□□□ -2.63
LINC01239-201ENST00000433645 DYNLRB1Q9NP97 96 aa-1.4□□□□□ -2.63
LINC01239-201ENST00000433645 SMIM21Q3B7S5 101 aa-1.41□□□□□ -2.64
LINC01239-201ENST00000433645 ARHGEF12Q9NZN5 1544 aa-1.41□□□□□ -2.64
LINC01239-201ENST00000433645 NSD3Q9BZ95 1437 aa-1.41□□□□□ -2.64
LINC01239-201ENST00000433645 POLA1P09884 1462 aaPredicted RBP-1.42□□□□□ -2.64
LINC01239-201ENST00000433645 LOC285095A0A1B0GVY8 99 aa-1.42□□□□□ -2.64
LINC01239-201ENST00000433645 IGLC7A0M8Q6 106 aa-1.42□□□□□ -2.64
LINC01239-201ENST00000433645 KRTAP20-2Q3LI61 65 aa-1.42□□□□□ -2.64
LINC01239-201ENST00000433645 MYOM1P52179 1685 aa-1.42□□□□□ -2.64
LINC01239-201ENST00000433645 TRBV7-3A0A075B6L6 115 aa-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 HIST1H1DP16402 221 aaKnown RBP-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 PDCD10Q9BUL8 212 aa-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 FXYD6Q9H0Q3 95 aa-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 RERGLQ9H628 205 aa-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 PSME4Q14997 1843 aa-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 ZFHX3Q15911 3703 aa-1.43□□□□□ -2.64
LINC01239-201ENST00000433645 TRBV7-4A0A0J9YYF1 115 aa-1.44□□□□□ -2.64
LINC01239-201ENST00000433645 KRTAP6-2Q3LI66 62 aa-1.44□□□□□ -2.64
LINC01239-201ENST00000433645 SERP1Q9Y6X1 66 aa-1.44□□□□□ -2.64
LINC01239-201ENST00000433645 HMGN4O00479 90 aa-1.45□□□□□ -2.64
LINC01239-201ENST00000433645 DEFB105AQ8NG35 78 aa-1.45□□□□□ -2.64
LINC01239-201ENST00000433645 TMEM263Q8WUH6 116 aaKnown RBP-1.45□□□□□ -2.64
LINC01239-201ENST00000433645 LSM10Q969L4 123 aaKnown RBP-1.45□□□□□ -2.64
LINC01239-201ENST00000433645 PAIP2BQ9ULR5 123 aaKnown RBP-1.45□□□□□ -2.64
LINC01239-201ENST00000433645 KIAA0556O60303 1618 aa-1.45□□□□□ -2.64
LINC01239-201ENST00000433645 SPRR2EP22531 72 aa-1.46□□□□□ -2.64
LINC01239-201ENST00000433645 SNRNP25Q9BV90 132 aaKnown RBP-1.46□□□□□ -2.64
LINC01239-201ENST00000433645 BTAF1O14981 1849 aa-1.46□□□□□ -2.64
LINC01239-201ENST00000433645 SFT2D2O95562 160 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms