RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
TREX1-201ENST00000433541 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
TREX1-201ENST00000433541 SMCO4Q9NRQ5 59 aa10.3□□□□□ -0.76
TREX1-201ENST00000433541 HECTD4Q9Y4D8 3996 aa10.3□□□□□ -0.76
TREX1-201ENST00000433541 FAT2Q9NYQ8 4349 aa10.29□□□□□ -0.76
TREX1-201ENST00000433541 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
TREX1-201ENST00000433541 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
TREX1-201ENST00000433541 Q8N814 137 aa10.29□□□□□ -0.76
TREX1-201ENST00000433541 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
TREX1-201ENST00000433541 UBE2D4Q9Y2X8 147 aa10.29□□□□□ -0.76
TREX1-201ENST00000433541 IGLV5-52A0A0A0MRZ9 124 aa10.28□□□□□ -0.76
TREX1-201ENST00000433541 IFI27P40305 119 aaPredicted RBP10.28□□□□□ -0.76
TREX1-201ENST00000433541 WFDC2Q14508 124 aa10.28□□□□□ -0.76
TREX1-201ENST00000433541 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
TREX1-201ENST00000433541 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
TREX1-201ENST00000433541 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
TREX1-201ENST00000433541 GAGE12HA6NDE8 117 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 PRSS47A8MTI9 375 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 SS18Q15532 418 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 C14orf177Q52M58 125 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 ALKBH7Q9BT30 221 aaPredicted RBP10.27□□□□□ -0.77
TREX1-201ENST00000433541 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
TREX1-201ENST00000433541 USP17L23D6RBM5 183 aa10.26□□□□□ -0.77
TREX1-201ENST00000433541 XCL1P47992 114 aa10.26□□□□□ -0.77
TREX1-201ENST00000433541 Q6ZUT4 128 aa10.26□□□□□ -0.77
TREX1-201ENST00000433541 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
TREX1-201ENST00000433541 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
TREX1-201ENST00000433541 CYSLTR1Q9Y271 337 aa10.26□□□□□ -0.77
TREX1-201ENST00000433541 CSDC2Q9Y534 153 aaKnown RBP10.26□□□□□ -0.77
TREX1-201ENST00000433541 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
TREX1-201ENST00000433541 K7EMI3 77 aa10.25□□□□□ -0.77
TREX1-201ENST00000433541 FA2HQ7L5A8 372 aa10.25□□□□□ -0.77
TREX1-201ENST00000433541 NTN5Q8WTR8 489 aaPredicted RBP10.25□□□□□ -0.77
TREX1-201ENST00000433541 PKD1P98161 4303 aa10.25□□□□□ -0.77
TREX1-201ENST00000433541 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
TREX1-201ENST00000433541 CCL25O15444 150 aa10.24□□□□□ -0.77
TREX1-201ENST00000433541 G0S2P27469 103 aa10.24□□□□□ -0.77
TREX1-201ENST00000433541 C2orf66Q6UXQ4 117 aa10.24□□□□□ -0.77
TREX1-201ENST00000433541 PKHD1P08F94 4074 aa10.23□□□□□ -0.77
TREX1-201ENST00000433541 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
TREX1-201ENST00000433541 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
TREX1-201ENST00000433541 Q6ZN92 141 aa10.22□□□□□ -0.77
TREX1-201ENST00000433541 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
TREX1-201ENST00000433541 hDV102S1A0JD36 115 aa10.21□□□□□ -0.77
TREX1-201ENST00000433541 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
TREX1-201ENST00000433541 GCSHP23434 173 aa10.21□□□□□ -0.77
TREX1-201ENST00000433541 CFAP161Q6P656 301 aa10.21□□□□□ -0.77
TREX1-201ENST00000433541 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.77
TREX1-201ENST00000433541 TEX43Q6ZNM6 134 aa10.2□□□□□ -0.78
TREX1-201ENST00000433541 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
TREX1-201ENST00000433541 YPEL4Q96NS1 127 aa10.2□□□□□ -0.78
TREX1-201ENST00000433541 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
TREX1-201ENST00000433541 MALP21145 153 aa10.19□□□□□ -0.78
TREX1-201ENST00000433541 MRPS36P82909 103 aaKnown RBP10.19□□□□□ -0.78
TREX1-201ENST00000433541 C2orf88Q9BSF0 95 aa10.19□□□□□ -0.78
TREX1-201ENST00000433541 PYGO1Q9Y3Y4 419 aa10.19□□□□□ -0.78
TREX1-201ENST00000433541 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
TREX1-201ENST00000433541 FOXI1Q12951 378 aa10.18□□□□□ -0.78
TREX1-201ENST00000433541 CD164L2Q6UWJ8 174 aa10.18□□□□□ -0.78
TREX1-201ENST00000433541 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
TREX1-201ENST00000433541 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
TREX1-201ENST00000433541 VCX2Q9H322 139 aa10.18□□□□□ -0.78
TREX1-201ENST00000433541 PRSS1P07477 247 aa10.17□□□□□ -0.78
TREX1-201ENST00000433541 RAB5BP61020 215 aa10.17□□□□□ -0.78
TREX1-201ENST00000433541 HIGD2BQ4VC39 106 aa10.17□□□□□ -0.78
TREX1-201ENST00000433541 PAPPA-AS1Q5QFB9 102 aa10.17□□□□□ -0.78
TREX1-201ENST00000433541 COX7A2LO14548 114 aa10.16□□□□□ -0.78
TREX1-201ENST00000433541 LINC01620Q4KN68 170 aa10.16□□□□□ -0.78
TREX1-201ENST00000433541 TOMM6Q96B49 74 aa10.16□□□□□ -0.78
TREX1-201ENST00000433541 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
TREX1-201ENST00000433541 SCO1O75880 301 aa10.15□□□□□ -0.78
TREX1-201ENST00000433541 TRGC2P03986 189 aa10.15□□□□□ -0.78
TREX1-201ENST00000433541 LINC00614P0C842 121 aa10.15□□□□□ -0.78
TREX1-201ENST00000433541 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
TREX1-201ENST00000433541 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
TREX1-201ENST00000433541 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
TREX1-201ENST00000433541 KRTAP10-1P60331 282 aa10.14□□□□□ -0.79
TREX1-201ENST00000433541 ERASQ7Z444 233 aa10.14□□□□□ -0.79
TREX1-201ENST00000433541 C5orf38Q86SI9 138 aa10.14□□□□□ -0.79
TREX1-201ENST00000433541 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
TREX1-201ENST00000433541 TIMM17AQ99595 171 aa10.14□□□□□ -0.79
TREX1-201ENST00000433541 IGIPA6NJ69 53 aa10.13□□□□□ -0.79
TREX1-201ENST00000433541 APOMO95445 188 aa10.13□□□□□ -0.79
TREX1-201ENST00000433541 ZC2HC1BQ5TFG8 222 aa10.13□□□□□ -0.79
TREX1-201ENST00000433541 BAGE3Q86Y29 109 aa10.13□□□□□ -0.79
TREX1-201ENST00000433541 FAM104AQ969W3 186 aa10.13□□□□□ -0.79
TREX1-201ENST00000433541 LINC01546A6NGU7 62 aa10.12□□□□□ -0.79
TREX1-201ENST00000433541 ZNF561-AS1K7EIQ3 104 aa10.12□□□□□ -0.79
TREX1-201ENST00000433541 NPSP0C0P6 89 aa10.12□□□□□ -0.79
TREX1-201ENST00000433541 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
TREX1-201ENST00000433541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.11□□□□□ -0.79
TREX1-201ENST00000433541 HBDP02042 147 aa10.11□□□□□ -0.79
TREX1-201ENST00000433541 NDUFA6P56556 154 aa10.11□□□□□ -0.79
TREX1-201ENST00000433541 COLCA2A8K830 154 aa10.1□□□□□ -0.79
TREX1-201ENST00000433541 CDK2AP2O75956 126 aa10.1□□□□□ -0.79
TREX1-201ENST00000433541 GVQW2A0A096LPI5 108 aaPredicted RBP10.09□□□□□ -0.79
TREX1-201ENST00000433541 UBE2D1P51668 147 aa10.09□□□□□ -0.79
TREX1-201ENST00000433541 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 294.2 ms