RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 DNAJC13O75165 2243 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 TEX49A0A1B0GTD5 131 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 A0A1B0GW54 56 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 Q6ZTC4 211 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 CNFNQ9BYD5 112 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 ABCA4P78363 2273 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 J3QL48 77 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 FHL2Q14192 279 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 LYPD5Q6UWN5 251 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 TEN1Q86WV5 123 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 C1orf137Q5JT78 98 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
UBR3-204ENST00000430321 ZNF80P51504 273 aaPredicted RBP4.26□□□□□ -1.73
UBR3-204ENST00000430321 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
UBR3-204ENST00000430321 COX8CQ7Z4L0 72 aa4.26□□□□□ -1.73
UBR3-204ENST00000430321 RNASE8Q8TDE3 154 aaKnown RBP4.26□□□□□ -1.73
UBR3-204ENST00000430321 COL4A2P08572 1712 aa4.26□□□□□ -1.73
UBR3-204ENST00000430321 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
UBR3-204ENST00000430321 NRACQ8N912 160 aa4.26□□□□□ -1.73
UBR3-204ENST00000430321 RNASE3P12724 160 aaKnown RBP4.25□□□□□ -1.73
UBR3-204ENST00000430321 C10orf99Q6UWK7 81 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 POLR2KP53803 58 aaKnown RBP4.25□□□□□ -1.73
UBR3-204ENST00000430321 PTPRSQ13332 1948 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 C18orf65Q6ZTR6 163 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 HIVEP2P31629 2446 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 Q6ZRP5 223 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 EML6Q6ZMW3 1958 aa4.25□□□□□ -1.73
UBR3-204ENST00000430321 ETDBQ3ZM63 59 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 GDF5OSQ5U4N7 250 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 MAP1BP46821 2468 aaKnown RBP4.24□□□□□ -1.73
UBR3-204ENST00000430321 CYSRT1A8MQ03 144 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 BRWD1-AS2P59051 145 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 PLA2G2EQ9NZK7 142 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 KIF25-AS1Q9Y6Z4 181 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 CEP290O15078 2479 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 MPDZO75970 2070 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 C16orf90A8MZG2 172 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 CDSNQ15517 529 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 C1orf158Q8N1D5 194 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 Q8N9L7 120 aa4.24□□□□□ -1.73
UBR3-204ENST00000430321 EP300Q09472 2414 aaPredicted RBP4.23□□□□□ -1.73
UBR3-204ENST00000430321 RETNQ9HD89 108 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 A8MZ25 164 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 IGLV2-8P01709 118 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 IGLV9-49A0A0B4J1Y8 123 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 CCKP06307 115 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 C6orf99Q4VX62 202 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 SPAG11AQ6PDA7 123 aa4.23□□□□□ -1.73
UBR3-204ENST00000430321 MUC6Q6W4X9 2439 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 DIDO1Q9BTC0 2240 aaKnown RBP4.22□□□□□ -1.73
UBR3-204ENST00000430321 DSCAMO60469 2012 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 ARHGAP21Q5T5U3 1957 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 LOC105371267A0A1B0GV96 52 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 DEFB1P60022 68 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 HEATR5AQ86XA9 2040 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 PHF3Q92576 2039 aaKnown RBP4.22□□□□□ -1.73
UBR3-204ENST00000430321 ZNF407Q9C0G0 2248 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 MALRD1Q5VYJ5 2156 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 Q6ZVQ6 151 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 WFDC10AQ9H1F0 79 aa4.22□□□□□ -1.73
UBR3-204ENST00000430321 PRB2P02812 416 aaPredicted RBP4.21□□□□□ -1.73
UBR3-204ENST00000430321 CRYGAP11844 174 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
UBR3-204ENST00000430321 COL6A6A6NMZ7 2263 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 GTF3C1Q12789 2109 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 LINC00173Q6ZV60 143 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 ZGRF1Q86YA3 2104 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 IGLV2-11P01706 119 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 BRWD1Q9NSI6 2320 aa4.21□□□□□ -1.74
UBR3-204ENST00000430321 IGKV2-28A0A075B6P5 120 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 IGKV2D-28P01615 120 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 DAND5Q8N907 189 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 SPINK6Q6UWN8 80 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 DOCK7Q96N67 2140 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 K7ERJ3 54 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 MRPS12O15235 138 aaKnown RBP4.2□□□□□ -1.74
UBR3-204ENST00000430321 PCP4P48539 62 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 KLK9Q2XQG4 91 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 CRIP3Q6Q6R5 217 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 Q6ZS46 218 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 Q9BRP9 147 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 CNOT1A5YKK6 2376 aaKnown RBP4.2□□□□□ -1.74
UBR3-204ENST00000430321 RPL37AP61513 92 aaKnown RBP4.2□□□□□ -1.74
UBR3-204ENST00000430321 IMUPQ9GZP8 106 aa4.2□□□□□ -1.74
UBR3-204ENST00000430321 RTL8CO15255 209 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 CPAMD8Q8IZJ3 1885 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 DOCK10Q96BY6 2186 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 LOC100131303A0A0U1RQF7 123 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 Q8NBF4 154 aa4.19□□□□□ -1.74
UBR3-204ENST00000430321 Q6ZQY7 126 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms