RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 HSBP1O75506 76 aa13.09□□□□□ -0.31
PTCD1-203ENST00000430029 HBDP02042 147 aa13.09□□□□□ -0.31
PTCD1-203ENST00000430029 ANGP03950 147 aaKnown RBP13.09□□□□□ -0.31
PTCD1-203ENST00000430029 G0S2P27469 103 aa13.09□□□□□ -0.31
PTCD1-203ENST00000430029 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
PTCD1-203ENST00000430029 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
PTCD1-203ENST00000430029 PYGO1Q9Y3Y4 419 aa13.09□□□□□ -0.31
PTCD1-203ENST00000430029 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.32
PTCD1-203ENST00000430029 Q6ZR54 194 aa13.08□□□□□ -0.32
PTCD1-203ENST00000430029 Q6ZUT4 128 aa13.08□□□□□ -0.32
PTCD1-203ENST00000430029 TMEM101Q96IK0 257 aa13.08□□□□□ -0.32
PTCD1-203ENST00000430029 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
PTCD1-203ENST00000430029 RNASE13Q5GAN3 156 aaKnown RBP13.07□□□□□ -0.32
PTCD1-203ENST00000430029 DGAT2L7PQ6IED9 249 aa13.07□□□□□ -0.32
PTCD1-203ENST00000430029 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 TRAV9-2A0A087WT02 112 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 K7EP13 123 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 TTC32Q5I0X7 151 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 CLPSL2Q6UWE3 100 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 ENHOQ6UWT2 76 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 LINC00269Q8N2A0 174 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 C10orf126Q8N4M7 172 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 SCGB3A1Q96QR1 104 aa13.06□□□□□ -0.32
PTCD1-203ENST00000430029 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
PTCD1-203ENST00000430029 ERASQ7Z444 233 aa13.05□□□□□ -0.32
PTCD1-203ENST00000430029 TIMM17AQ99595 171 aa13.05□□□□□ -0.32
PTCD1-203ENST00000430029 PRR34Q9NV39 138 aa13.05□□□□□ -0.32
PTCD1-203ENST00000430029 LINC01549A6NIU2 74 aa13.04□□□□□ -0.32
PTCD1-203ENST00000430029 REG3AQ06141 175 aa13.04□□□□□ -0.32
PTCD1-203ENST00000430029 ZC2HC1BQ5TFG8 222 aa13.04□□□□□ -0.32
PTCD1-203ENST00000430029 UBE2WQ96B02 151 aa13.04□□□□□ -0.32
PTCD1-203ENST00000430029 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
PTCD1-203ENST00000430029 RYR2Q92736 4967 aa13.02□□□□□ -0.32
PTCD1-203ENST00000430029 IGKV3OR2-268A0A0C4DH90 116 aa13.02□□□□□ -0.33
PTCD1-203ENST00000430029 TMEM141Q96I45 108 aa13.02□□□□□ -0.33
PTCD1-203ENST00000430029 NPSP0C0P6 89 aa13.01□□□□□ -0.33
PTCD1-203ENST00000430029 Q9HAA7 133 aa13.01□□□□□ -0.33
PTCD1-203ENST00000430029 CRPP02741 224 aa13□□□□□ -0.33
PTCD1-203ENST00000430029 AMELXQ99217 191 aa13□□□□□ -0.33
PTCD1-203ENST00000430029 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-203ENST00000430029 BAALCQ8WXS3 180 aa12.99□□□□□ -0.33
PTCD1-203ENST00000430029 TRAV8-3A0A0A6YYJ7 113 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 ATP5LO75964 103 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 LEPROTL1O95214 131 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 S100A6P06703 90 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 FABP4P15090 132 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 MIAQ16674 131 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 TEX43Q6ZNM6 134 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 VCX2Q9H322 139 aa12.98□□□□□ -0.33
PTCD1-203ENST00000430029 DNAH2Q9P225 4427 aa12.97□□□□□ -0.33
PTCD1-203ENST00000430029 IGLV10-54A0A075B6I4 117 aa12.97□□□□□ -0.33
PTCD1-203ENST00000430029 Q6ZN92 141 aa12.97□□□□□ -0.33
PTCD1-203ENST00000430029 IFI27L1Q96BM0 104 aa12.97□□□□□ -0.33
PTCD1-203ENST00000430029 TRAV13-1A0A0B4J241 112 aa12.96□□□□□ -0.33
PTCD1-203ENST00000430029 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
PTCD1-203ENST00000430029 SNRPEP62304 92 aaKnown RBP12.96□□□□□ -0.33
PTCD1-203ENST00000430029 PAPPA-AS1Q5QFB9 102 aa12.96□□□□□ -0.33
PTCD1-203ENST00000430029 KRTAP26-1Q6PEX3 210 aa12.96□□□□□ -0.33
PTCD1-203ENST00000430029 HIST3H2BBQ8N257 126 aa12.96□□□□□ -0.33
PTCD1-203ENST00000430029 C6orf223Q8N319 242 aa12.96□□□□□ -0.33
PTCD1-203ENST00000430029 TMA7Q9Y2S6 64 aaKnown RBP12.96□□□□□ -0.33
PTCD1-203ENST00000430029 DNAH10Q8IVF4 4471 aa12.96□□□□□ -0.34
PTCD1-203ENST00000430029 C5orf52A6NGY3 159 aa12.95□□□□□ -0.34
PTCD1-203ENST00000430029 Q6ZRN7 208 aaPredicted RBP12.95□□□□□ -0.34
PTCD1-203ENST00000430029 IGKV2D-24A0A075B6R9 120 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 TRAV8-4A0A0B4J246 113 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 PRSS29PA6NIE9 313 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 UBE2D1P51668 147 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 PMVKQ15126 192 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 CST9LQ9H4G1 147 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 HSPB8Q9UJY1 196 aa12.94□□□□□ -0.34
PTCD1-203ENST00000430029 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
PTCD1-203ENST00000430029 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
PTCD1-203ENST00000430029 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
PTCD1-203ENST00000430029 C1orf43Q9BWL3 253 aa12.93□□□□□ -0.34
PTCD1-203ENST00000430029 FRAS1Q86XX4 4008 aa12.92□□□□□ -0.34
PTCD1-203ENST00000430029 CCL25O15444 150 aa12.92□□□□□ -0.34
PTCD1-203ENST00000430029 SS18Q15532 418 aa12.92□□□□□ -0.34
PTCD1-203ENST00000430029 NFE4Q86UQ8 179 aa12.92□□□□□ -0.34
PTCD1-203ENST00000430029 PACRGQ96M98 296 aaPredicted RBP12.92□□□□□ -0.34
PTCD1-203ENST00000430029 PRSS1P07477 247 aa12.91□□□□□ -0.34
PTCD1-203ENST00000430029 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
PTCD1-203ENST00000430029 RMI2Q96E14 147 aa12.91□□□□□ -0.34
PTCD1-203ENST00000430029 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
PTCD1-203ENST00000430029 XCL1P47992 114 aa12.9□□□□□ -0.34
PTCD1-203ENST00000430029 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
PTCD1-203ENST00000430029 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
PTCD1-203ENST00000430029 HIST1H2BLQ99880 126 aa12.9□□□□□ -0.34
PTCD1-203ENST00000430029 TRAV12-1A0A0B4J245 112 aa12.89□□□□□ -0.35
PTCD1-203ENST00000430029 A0A0J9YXV3 536 aa12.89□□□□□ -0.35
PTCD1-203ENST00000430029 RTL8CO15255 209 aa12.89□□□□□ -0.35
PTCD1-203ENST00000430029 COX6A2Q02221 97 aa12.89□□□□□ -0.35
PTCD1-203ENST00000430029 FOXI1Q12951 378 aa12.89□□□□□ -0.35
PTCD1-203ENST00000430029 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
PTCD1-203ENST00000430029 DNAH17Q9UFH2 4485 aa12.88□□□□□ -0.35
PTCD1-203ENST00000430029 H0Y8G0 127 aa12.88□□□□□ -0.35
PTCD1-203ENST00000430029 S100A2P29034 98 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms