RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 XCL2Q9UBD3 114 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 IGHV3OR16-12A0A075B7B8 117 aa8.26□□□□□ -1.09
LINC01238-203ENST00000429456 NPC2P61916 151 aa8.26□□□□□ -1.09
LINC01238-203ENST00000429456 C1orf158Q8N1D5 194 aa8.26□□□□□ -1.09
LINC01238-203ENST00000429456 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
LINC01238-203ENST00000429456 UTP20O75691 2785 aaKnown RBP8.26□□□□□ -1.09
LINC01238-203ENST00000429456 POLQO75417 2590 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 PRB1P04280 392 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
LINC01238-203ENST00000429456 COX6A2Q02221 97 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 Q6ZSV7 163 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 LRRC75A-AS1Q8N1F1 130 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 MXRA5Q9NR99 2828 aa8.25□□□□□ -1.09
LINC01238-203ENST00000429456 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 COX6CP09669 75 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 HERVK_113P63121 156 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 GAGE5Q13069 117 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 GAGE6Q13070 117 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 LINC00242Q5T6M2 205 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 STHQ8IWL8 128 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 Q96MF0 132 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 USP24Q9UPU5 2620 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 TRGV1A0A0A0MS02 117 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 TMEM86BQ8N661 226 aa8.24□□□□□ -1.09
LINC01238-203ENST00000429456 MYO18BQ8IUG5 2567 aa8.23□□□□□ -1.09
LINC01238-203ENST00000429456 F8WDY8 70 aa8.23□□□□□ -1.09
LINC01238-203ENST00000429456 H7C423 109 aa8.23□□□□□ -1.09
LINC01238-203ENST00000429456 LINC00694P0DN24 101 aa8.23□□□□□ -1.09
LINC01238-203ENST00000429456 DAND5Q8N907 189 aa8.23□□□□□ -1.09
LINC01238-203ENST00000429456 TRBV10-1A0A0K0K1A3 114 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
LINC01238-203ENST00000429456 FAM208BQ5VWN6 2430 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 ZFYVE26Q68DK2 2539 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 H3BT86 120 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 K7EQD1 137 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 LST1O00453 97 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 RPL36AP83881 106 aaKnown RBP8.22□□□□□ -1.09
LINC01238-203ENST00000429456 CIRBPQ14011 172 aaKnown RBP8.22□□□□□ -1.09
LINC01238-203ENST00000429456 NTM-AS1Q6ZSK4 140 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 KRTAP1-3Q8IUG1 177 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 RPL36ALQ969Q0 106 aaKnown RBP8.22□□□□□ -1.09
LINC01238-203ENST00000429456 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 AKAP9Q99996 3911 aa8.22□□□□□ -1.09
LINC01238-203ENST00000429456 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.09
LINC01238-203ENST00000429456 Q6ZTI0 123 aa8.21□□□□□ -1.09
LINC01238-203ENST00000429456 DAZ4Q86SG3 579 aaKnown RBP8.21□□□□□ -1.09
LINC01238-203ENST00000429456 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.09
LINC01238-203ENST00000429456 Q9H8V8 135 aa8.21□□□□□ -1.09
LINC01238-203ENST00000429456 DAZ3Q9NR90 486 aaKnown RBP8.21□□□□□ -1.09
LINC01238-203ENST00000429456 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
LINC01238-203ENST00000429456 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
LINC01238-203ENST00000429456 B5MCH6 92 aa8.21□□□□□ -1.1
LINC01238-203ENST00000429456 PPDPFQ9H3Y8 114 aa8.21□□□□□ -1.1
LINC01238-203ENST00000429456 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
LINC01238-203ENST00000429456 NDUFA7O95182 113 aa8.2□□□□□ -1.1
LINC01238-203ENST00000429456 BBC3Q96PG8 261 aaPredicted RBP8.2□□□□□ -1.1
LINC01238-203ENST00000429456 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
LINC01238-203ENST00000429456 CCL24O00175 119 aa8.2□□□□□ -1.1
LINC01238-203ENST00000429456 CDC42SE2Q9NRR3 84 aa8.2□□□□□ -1.1
LINC01238-203ENST00000429456 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
LINC01238-203ENST00000429456 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
LINC01238-203ENST00000429456 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
LINC01238-203ENST00000429456 DNAJC9-AS1A6NH13 148 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 F5H768 121 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 TEX29Q8N6K0 151 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 C11orf44Q8N8P7 122 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
LINC01238-203ENST00000429456 MYO9AB2RTY4 2548 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 GAGE12JA6NER3 117 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 GAGE4Q13068 117 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 SOSTDC1Q6X4U4 206 aa8.18□□□□□ -1.1
LINC01238-203ENST00000429456 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
LINC01238-203ENST00000429456 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
LINC01238-203ENST00000429456 ZNF843Q8N446 348 aa8.17□□□□□ -1.1
LINC01238-203ENST00000429456 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
LINC01238-203ENST00000429456 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
LINC01238-203ENST00000429456 SNCGO76070 127 aa8.17□□□□□ -1.1
LINC01238-203ENST00000429456 GIG44P09565 113 aaPredicted RBP8.17□□□□□ -1.1
LINC01238-203ENST00000429456 NOP10Q9NPE3 64 aaKnown RBP8.17□□□□□ -1.1
LINC01238-203ENST00000429456 ZNF462Q96JM2 2506 aa8.16□□□□□ -1.1
LINC01238-203ENST00000429456 WNK1Q9H4A3 2382 aa8.16□□□□□ -1.1
LINC01238-203ENST00000429456 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
LINC01238-203ENST00000429456 CRLF1O75462 422 aa8.16□□□□□ -1.1
LINC01238-203ENST00000429456 PRIMA1Q86XR5 153 aa8.16□□□□□ -1.1
LINC01238-203ENST00000429456 LRRK2Q5S007 2527 aa8.16□□□□□ -1.1
LINC01238-203ENST00000429456 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
LINC01238-203ENST00000429456 TMEM243Q9BU79 118 aa8.15□□□□□ -1.1
LINC01238-203ENST00000429456 ESM1Q9NQ30 184 aa8.15□□□□□ -1.1
LINC01238-203ENST00000429456 ZNF469Q96JG9 3925 aaPredicted RBP8.15□□□□□ -1.1
LINC01238-203ENST00000429456 COX7A2LO14548 114 aa8.15□□□□□ -1.11
LINC01238-203ENST00000429456 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.11
LINC01238-203ENST00000429456 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.11
LINC01238-203ENST00000429456 UBE2L6O14933 153 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms