RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GAGE12JA6NER3 117 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 RBMY1DP0C7P1 496 aaKnown RBP9.1□□□□□ -0.95
CDH3-202ENST00000429102 IFITM1P13164 125 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 GAGE4Q13068 117 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 RHOHQ15669 191 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 PLA2G2AP14555 144 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 COX6A2Q02221 97 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 ITPR3Q14573 2671 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 K7EMT4 169 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 NSUN5P1Q3KNT7 163 aa9.1□□□□□ -0.95
CDH3-202ENST00000429102 TRBV6-5A0A0K0K1A5 114 aa9.09□□□□□ -0.95
CDH3-202ENST00000429102 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
CDH3-202ENST00000429102 H3BUA1 57 aa9.09□□□□□ -0.96
CDH3-202ENST00000429102 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.96
CDH3-202ENST00000429102 SETXQ7Z333 2677 aaKnown RBP9.08□□□□□ -0.96
CDH3-202ENST00000429102 IGHV1-58A0A0C4DH39 117 aa9.08□□□□□ -0.96
CDH3-202ENST00000429102 GAGE7O76087 117 aa9.08□□□□□ -0.96
CDH3-202ENST00000429102 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
CDH3-202ENST00000429102 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
CDH3-202ENST00000429102 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
CDH3-202ENST00000429102 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
CDH3-202ENST00000429102 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
CDH3-202ENST00000429102 OR13C6PQ8NH95 151 aa9.07□□□□□ -0.96
CDH3-202ENST00000429102 AKAP9Q99996 3911 aa9.07□□□□□ -0.96
CDH3-202ENST00000429102 PIK3CD-AS1Q5SR53 167 aa9.07□□□□□ -0.96
CDH3-202ENST00000429102 PRIMA1Q86XR5 153 aa9.07□□□□□ -0.96
CDH3-202ENST00000429102 KLK9Q2XQG4 91 aa9.07□□□□□ -0.96
CDH3-202ENST00000429102 VSIG2Q96IQ7 327 aa9.07□□□□□ -0.96
CDH3-202ENST00000429102 H7C423 109 aa9.06□□□□□ -0.96
CDH3-202ENST00000429102 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
CDH3-202ENST00000429102 WFDC10AQ9H1F0 79 aa9.06□□□□□ -0.96
CDH3-202ENST00000429102 RPL35AP18077 110 aaKnown RBP9.06□□□□□ -0.96
CDH3-202ENST00000429102 Q9HAA7 133 aa9.06□□□□□ -0.96
CDH3-202ENST00000429102 KRTAP10-9P60411 292 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 GAGE2AQ6NT46 116 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 ZNF415Q09FC8 603 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 UBE2D4Q9Y2X8 147 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 TRBV7-9A0A0J9YWB2 115 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 TMEM101Q96IK0 257 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 CHCHD7Q9BUK0 85 aa9.05□□□□□ -0.96
CDH3-202ENST00000429102 ZNF469Q96JG9 3925 aaPredicted RBP9.05□□□□□ -0.96
CDH3-202ENST00000429102 TRBV10-2A0A0K0K1G8 114 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 Q6ZTI0 123 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 LINC01356Q8N9X3 169 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 STHQ8IWL8 128 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 LOC100131303A0A0U1RQF7 123 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
CDH3-202ENST00000429102 Q8N2B8 174 aa9.04□□□□□ -0.96
CDH3-202ENST00000429102 PFN2P35080 140 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 HERV-K104P63124 156 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 LITAFQ99732 161 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 NOP10Q9NPE3 64 aaKnown RBP9.03□□□□□ -0.96
CDH3-202ENST00000429102 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 FAM236AA0A1B0GUQ0 79 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 FAM236BA0A1B0GV22 79 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
CDH3-202ENST00000429102 MIAQ16674 131 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 A0A096LPF7 62 aa9.03□□□□□ -0.96
CDH3-202ENST00000429102 MAP6D1Q9H9H5 199 aa9.02□□□□□ -0.97
CDH3-202ENST00000429102 APCP25054 2843 aa9.02□□□□□ -0.97
CDH3-202ENST00000429102 HIST2H2BCQ6DN03 193 aa9.01□□□□□ -0.97
CDH3-202ENST00000429102 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
CDH3-202ENST00000429102 ZNF702PQ9H963 129 aa9.01□□□□□ -0.97
CDH3-202ENST00000429102 UBE2L6O14933 153 aa9.01□□□□□ -0.97
CDH3-202ENST00000429102 MRPL23Q16540 153 aaKnown RBP9.01□□□□□ -0.97
CDH3-202ENST00000429102 ODF3Q96PU9 254 aa9.01□□□□□ -0.97
CDH3-202ENST00000429102 LINC00158P58513 81 aa9.01□□□□□ -0.97
CDH3-202ENST00000429102 TRBV30A0A0K0K1B3 111 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 INSP01308 110 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 SBSPONQ8IVN8 264 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 DNAL4O96015 105 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 ATP5G1P05496 136 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
CDH3-202ENST00000429102 C5orf38Q86SI9 138 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 EDA2RQ9HAV5 297 aa8.99□□□□□ -0.97
CDH3-202ENST00000429102 ITPR2Q14571 2701 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 DEFB130BP0DP73 79 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 DEFB130AP0DP74 79 aa8.98□□□□□ -0.97
CDH3-202ENST00000429102 CITED2Q99967 270 aaPredicted RBP8.98□□□□□ -0.97
CDH3-202ENST00000429102 BAALC-AS2P0C853 105 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 RPL36AP83881 106 aaKnown RBP8.97□□□□□ -0.97
CDH3-202ENST00000429102 RPL36ALQ969Q0 106 aaKnown RBP8.97□□□□□ -0.97
CDH3-202ENST00000429102 Q96MF0 132 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 YAE1D1Q9NRH1 226 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 PEMTQ9UBM1 199 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 PRORYQ9H606 182 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 ESM1Q9NQ30 184 aa8.97□□□□□ -0.97
CDH3-202ENST00000429102 TMEM89A2RUT3 159 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms