RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 HLA-DRB4P13762 266 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 COX7CP15954 63 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 NPC2P61916 151 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 UBE2L3P68036 154 aaKnown RBP2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 HBG1P69891 147 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 HBG2P69892 147 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 C12orf73Q69YU5 71 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 C6orf201Q7Z4U5 140 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 ZC2HC1AQ96GY0 325 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 CARD19Q96LW7 228 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 IMUPQ9GZP8 106 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC00574Q9H8X3 128 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 TMEM14AQ9Y6G1 99 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 HLA-DRB4X5D2U9 266 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 FAT2Q9NYQ8 4349 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 DYNC1H1Q14204 4646 aaKnown RBP2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 DNAH17Q9UFH2 4485 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV12-2A0A075B6T6 113 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV3-72A0A0B4J1Y9 119 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV4A0A0B4J268 109 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 ATOX1O00244 68 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV3-23P01764 117 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SCGB1C2P0DMR2 95 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 CGB3P0DN86 165 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 CGB7P0DN87 165 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SUB1P53999 127 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 PSMG4Q5JS54 123 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SCGB1D4Q6XE38 83 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 ZNF493Q6ZR52 646 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC01561Q8N1V8 128 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC00311Q8N616 119 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 C15orf53Q8NAA6 179 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGF2BP2-AS1Q96M15 143 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 MGST2Q99735 147 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 RNF126Q9BV68 326 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 TM2D1Q9BX74 207 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 GNB1LQ9BYB4 327 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 AGPAT4-IT1Q9H0P7 198 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 CALYQ9NYX4 217 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 KLK12Q9UKR0 248 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 HERC1Q15751 4861 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 PKD1P98161 4303 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRBV19A0A075B6N1 114 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV8-1A0A0A6YYK1 113 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV7-81A0A0B4J1V7 117 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV1-1A0A0B4J248 108 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CEBPZOSA8MTT3 80 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 E9PLD3 99 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SSSCA1O60232 199 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV3-11P01762 117 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGKCP01834 107 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CXCL5P42830 114 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 RPL23P62829 140 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ2Q13117 558 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CDK5R1Q15078 307 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC00305Q7Z4B0 112 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ4Q86SG3 579 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SRSF12Q8WXF0 261 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 LEAP2Q969E1 77 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SPACA5Q96QH8 159 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SHANK2-AS3Q9BTD1 123 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ1Q9NQZ3 744 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ3Q9NR90 486 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CKLFQ9UBR5 152 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 HSPG2P98160 4391 aa2.96□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGKV1-27A0A075B6S5 117 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRBV7-7A0A0K0K1E9 115 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 LOC107986453A0A1B0GWG9 222 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 PGPA6NDG6 321 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 H3BUA1 57 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 PDCD6O75340 191 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 HLA-DQA1P01909 254 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 APCSP02743 223 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRGV3P03979 118 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TCRAP04437 139 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 CD7P09564 240 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 CCL1P22362 96 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF137PP52743 207 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 SYNJ2BPP57105 145 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 SP6Q3SY56 376 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 CFAP126Q5VTH2 177 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 LHFPL1Q86WI0 220 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 RNF182Q8N6D2 247 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 NPBQ8NG41 125 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TSKUQ8WUA8 353 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 OTORQ9NRC9 128 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF355PQ9NSJ1 428 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 R4GMQ9 66 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGHV1-24A0A0C4DH33 117 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 IZUMO1RA6ND01 250 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGLL5B9A064 214 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 C11orf94C9JXX5 98 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms