RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 LRCOL1A6NCL2 159 aa15.59■□□□□ 0.09
GLI3-202ENST00000428534 SPATA12Q7Z6I5 190 aa15.59■□□□□ 0.09
GLI3-202ENST00000428534 Q8N8P6 123 aa15.59■□□□□ 0.09
GLI3-202ENST00000428534 TIMM21Q9BVV7 248 aa15.59■□□□□ 0.09
GLI3-202ENST00000428534 LOC389332A0A1B0GUA5 103 aa15.58■□□□□ 0.08
GLI3-202ENST00000428534 G0S2P27469 103 aa15.58■□□□□ 0.08
GLI3-202ENST00000428534 FABP9Q0Z7S8 132 aa15.58■□□□□ 0.08
GLI3-202ENST00000428534 CLPSL2Q6UWE3 100 aa15.58■□□□□ 0.08
GLI3-202ENST00000428534 MRPL18Q9H0U6 180 aaKnown RBP15.58■□□□□ 0.08
GLI3-202ENST00000428534 SMCO4Q9NRQ5 59 aa15.58■□□□□ 0.08
GLI3-202ENST00000428534 ABCA13Q86UQ4 5058 aa15.58■□□□□ 0.08
GLI3-202ENST00000428534 TGIF2-C20orf24A0A0A6YYL0 155 aa15.57■□□□□ 0.08
GLI3-202ENST00000428534 ORMDL2Q53FV1 153 aa15.57■□□□□ 0.08
GLI3-202ENST00000428534 NTN5Q8WTR8 489 aaPredicted RBP15.57■□□□□ 0.08
GLI3-202ENST00000428534 KIAA1644Q3SXP7 199 aa15.56■□□□□ 0.08
GLI3-202ENST00000428534 C14orf177Q52M58 125 aa15.56■□□□□ 0.08
GLI3-202ENST00000428534 ZNF664Q8N3J9 261 aa15.56■□□□□ 0.08
GLI3-202ENST00000428534 TRAPPC1Q9Y5R8 145 aa15.56■□□□□ 0.08
GLI3-202ENST00000428534 CDC42SE2Q9NRR3 84 aa15.55■□□□□ 0.08
GLI3-202ENST00000428534 SPANXA1Q9NS26 97 aa15.55■□□□□ 0.08
GLI3-202ENST00000428534 UBE2D4Q9Y2X8 147 aa15.55■□□□□ 0.08
GLI3-202ENST00000428534 CCL25O15444 150 aa15.54■□□□□ 0.08
GLI3-202ENST00000428534 Q8N814 137 aa15.54■□□□□ 0.08
GLI3-202ENST00000428534 C16orf90A8MZG2 172 aa15.53■□□□□ 0.08
GLI3-202ENST00000428534 BAALCQ8WXS3 180 aa15.53■□□□□ 0.08
GLI3-202ENST00000428534 ALKBH7Q9BT30 221 aaPredicted RBP15.53■□□□□ 0.08
GLI3-202ENST00000428534 MAPKAPK5-AS1Q8N8E1 139 aa15.52■□□□□ 0.08
GLI3-202ENST00000428534 PRSS3P2Q8NHM4 247 aa15.52■□□□□ 0.08
GLI3-202ENST00000428534 IGLV10-54A0A075B6I4 117 aa15.51■□□□□ 0.07
GLI3-202ENST00000428534 IFI27P40305 119 aaPredicted RBP15.51■□□□□ 0.07
GLI3-202ENST00000428534 SS18Q15532 418 aa15.51■□□□□ 0.07
GLI3-202ENST00000428534 IGKV3OR2-268A0A0C4DH90 116 aa15.5■□□□□ 0.07
GLI3-202ENST00000428534 KRTAP10-2P60368 255 aa15.5■□□□□ 0.07
GLI3-202ENST00000428534 HSPG2P98160 4391 aa15.5■□□□□ 0.07
GLI3-202ENST00000428534 LINC01549A6NIU2 74 aa15.49■□□□□ 0.07
GLI3-202ENST00000428534 MRPS36P82909 103 aaKnown RBP15.49■□□□□ 0.07
GLI3-202ENST00000428534 CYSLTR1Q9Y271 337 aa15.49■□□□□ 0.07
GLI3-202ENST00000428534 PYGO1Q9Y3Y4 419 aa15.49■□□□□ 0.07
GLI3-202ENST00000428534 RPL39P62891 51 aaKnown RBP15.48■□□□□ 0.07
GLI3-202ENST00000428534 KRTAP26-1Q6PEX3 210 aa15.48■□□□□ 0.07
GLI3-202ENST00000428534 YPEL4Q96NS1 127 aa15.48■□□□□ 0.07
GLI3-202ENST00000428534 LINC00959A0A1B0GUT2 108 aa15.47■□□□□ 0.07
GLI3-202ENST00000428534 CFAP161Q6P656 301 aa15.47■□□□□ 0.07
GLI3-202ENST00000428534 CHCHD10Q8WYQ3 142 aaPredicted RBP15.47■□□□□ 0.07
GLI3-202ENST00000428534 IGLV5-52A0A0A0MRZ9 124 aa15.46■□□□□ 0.07
GLI3-202ENST00000428534 C1orf196B1AJZ1 125 aa15.46■□□□□ 0.07
GLI3-202ENST00000428534 LECT2O14960 151 aa15.46■□□□□ 0.07
GLI3-202ENST00000428534 NPSP0C0P6 89 aa15.46■□□□□ 0.07
GLI3-202ENST00000428534 C2orf66Q6UXQ4 117 aa15.45■□□□□ 0.06
GLI3-202ENST00000428534 CBLN2Q8IUK8 224 aa15.45■□□□□ 0.06
GLI3-202ENST00000428534 GAGE12HA6NDE8 117 aa15.44■□□□□ 0.06
GLI3-202ENST00000428534 FA2HQ7L5A8 372 aa15.44■□□□□ 0.06
GLI3-202ENST00000428534 LINC01546A6NGU7 62 aa15.43■□□□□ 0.06
GLI3-202ENST00000428534 USP17L23D6RBM5 183 aa15.43■□□□□ 0.06
GLI3-202ENST00000428534 WFDC2Q14508 124 aa15.43■□□□□ 0.06
GLI3-202ENST00000428534 PAPPA-AS1Q5QFB9 102 aa15.43■□□□□ 0.06
GLI3-202ENST00000428534 Q6ZUT4 128 aa15.43■□□□□ 0.06
GLI3-202ENST00000428534 RAB5BP61020 215 aa15.42■□□□□ 0.06
GLI3-202ENST00000428534 CD164L2Q6UWJ8 174 aa15.42■□□□□ 0.06
GLI3-202ENST00000428534 Q6ZN92 141 aa15.42■□□□□ 0.06
GLI3-202ENST00000428534 LRP1BQ9NZR2 4599 aa15.42■□□□□ 0.06
GLI3-202ENST00000428534 GCSHP23434 173 aa15.41■□□□□ 0.06
GLI3-202ENST00000428534 TMEM141Q96I45 108 aa15.41■□□□□ 0.06
GLI3-202ENST00000428534 KRTAP4-5Q9BYR2 181 aa15.41■□□□□ 0.06
GLI3-202ENST00000428534 XCL1P47992 114 aa15.4■□□□□ 0.06
GLI3-202ENST00000428534 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.39■□□□□ 0.05
GLI3-202ENST00000428534 TRAV13-1A0A0B4J241 112 aa15.39■□□□□ 0.05
GLI3-202ENST00000428534 TOMM6Q96B49 74 aa15.39■□□□□ 0.05
GLI3-202ENST00000428534 RNASE13Q5GAN3 156 aaKnown RBP15.38■□□□□ 0.05
GLI3-202ENST00000428534 TEX43Q6ZNM6 134 aa15.38■□□□□ 0.05
GLI3-202ENST00000428534 C18orf32Q8TCD1 76 aa15.38■□□□□ 0.05
GLI3-202ENST00000428534 C2orf88Q9BSF0 95 aa15.38■□□□□ 0.05
GLI3-202ENST00000428534 AP5S1Q9NUS5 200 aa15.38■□□□□ 0.05
GLI3-202ENST00000428534 IGLV4-3A0A075B6K6 122 aa15.37■□□□□ 0.05
GLI3-202ENST00000428534 IFITM10A6NMD0 228 aa15.37■□□□□ 0.05
GLI3-202ENST00000428534 LINC00614P0C842 121 aa15.37■□□□□ 0.05
GLI3-202ENST00000428534 FOXI1Q12951 378 aa15.37■□□□□ 0.05
GLI3-202ENST00000428534 TIMM17AQ99595 171 aa15.37■□□□□ 0.05
GLI3-202ENST00000428534 VCX2Q9H322 139 aa15.36■□□□□ 0.05
GLI3-202ENST00000428534 hDV102S1A0JD36 115 aa15.35■□□□□ 0.05
GLI3-202ENST00000428534 IGIPA6NJ69 53 aa15.35■□□□□ 0.05
GLI3-202ENST00000428534 ERASQ7Z444 233 aa15.35■□□□□ 0.05
GLI3-202ENST00000428534 OPRPNQ99935 248 aaPredicted RBP15.35■□□□□ 0.05
GLI3-202ENST00000428534 IGHV1-58A0A0C4DH39 117 aa15.34■□□□□ 0.05
GLI3-202ENST00000428534 PRSS1P07477 247 aa15.34■□□□□ 0.05
GLI3-202ENST00000428534 FAM104AQ969W3 186 aa15.34■□□□□ 0.05
GLI3-202ENST00000428534 SCGB3A1Q96QR1 104 aa15.34■□□□□ 0.05
GLI3-202ENST00000428534 COX7A2LO14548 114 aa15.33■□□□□ 0.04
GLI3-202ENST00000428534 CDK2AP2O75956 126 aa15.33■□□□□ 0.04
GLI3-202ENST00000428534 MALP21145 153 aa15.33■□□□□ 0.04
GLI3-202ENST00000428534 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.32■□□□□ 0.04
GLI3-202ENST00000428534 APOMO95445 188 aa15.32■□□□□ 0.04
GLI3-202ENST00000428534 FUSP35637 526 aaKnown RBP eCLIP15.32■□□□□ 0.04
GLI3-202ENST00000428534 APOBP04114 4563 aaKnown RBP15.32■□□□□ 0.04
GLI3-202ENST00000428534 COLCA2A8K830 154 aa15.31■□□□□ 0.04
GLI3-202ENST00000428534 SEC11AP67812 179 aa15.31■□□□□ 0.04
GLI3-202ENST00000428534 AMELXQ99217 191 aa15.31■□□□□ 0.04
GLI3-202ENST00000428534 TRGC2P03986 189 aa15.3■□□□□ 0.04
GLI3-202ENST00000428534 CNBPP62633 177 aaKnown RBP15.3■□□□□ 0.04
GLI3-202ENST00000428534 GVQW2A0A096LPI5 108 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms