RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 FOXA3P55318 350 aaPredicted RBP4.82□□□□□ -1.64
ITSN1-216ENST00000428240 TWIST1Q15672 202 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 SFT2D1Q8WV19 159 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 C2orf48Q96LS8 159 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 CYTL1Q9NRR1 136 aa4.82□□□□□ -1.64
ITSN1-216ENST00000428240 FXYD6-FXYD2A0A087WZ82 144 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 COX7A2LO14548 114 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 TSHBP01222 138 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 IFNA1P01562 189 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 FAM19A5Q7Z5A7 132 aaPredicted RBP4.81□□□□□ -1.64
ITSN1-216ENST00000428240 C9orf62Q8N4C0 152 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 MBD3L1Q8WWY6 194 aa4.81□□□□□ -1.64
ITSN1-216ENST00000428240 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
ITSN1-216ENST00000428240 CARHSP1Q9Y2V2 147 aaKnown RBP4.81□□□□□ -1.64
ITSN1-216ENST00000428240 XKRY2A2RUG3 117 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 RAB19A4D1S5 217 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 I3L3M4 83 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 PMCHP20382 165 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 CTRLP40313 264 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 SPAG11BQ08648 103 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 RNASE13Q5GAN3 156 aaKnown RBP4.8□□□□□ -1.64
ITSN1-216ENST00000428240 C5orf38Q86SI9 138 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 KCNRGQ8N5I3 272 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 FAM213BQ8TBF2 198 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 TSKUQ8WUA8 353 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 RETNLBQ9BQ08 111 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 CNFNQ9BYD5 112 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 TMEM242Q9NWH2 141 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 NDUFA13Q9P0J0 144 aa4.8□□□□□ -1.64
ITSN1-216ENST00000428240 A0A087X002 238 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 C1orf196B1AJZ1 125 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 G3V3Q6 166 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 UBE2BP63146 152 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 C10orf25Q5T742 122 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 MRPL52Q86TS9 123 aaKnown RBP4.79□□□□□ -1.64
ITSN1-216ENST00000428240 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
ITSN1-216ENST00000428240 RNASE7Q9H1E1 156 aaKnown RBP4.79□□□□□ -1.64
ITSN1-216ENST00000428240 TRBV20OR9-2A0A075B6H5 130 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 TRBV6-5A0A0K0K1A5 114 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 M0QXV9 152 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 GIPP09681 153 aaPredicted RBP4.78□□□□□ -1.64
ITSN1-216ENST00000428240 GNG4P50150 75 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 CDIP1Q9H305 208 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 MRPL35Q9NZE8 188 aaKnown RBP4.78□□□□□ -1.64
ITSN1-216ENST00000428240 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
ITSN1-216ENST00000428240 ZNF861PO60384 105 aa4.77□□□□□ -1.65
ITSN1-216ENST00000428240 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
ITSN1-216ENST00000428240 CCL20P78556 96 aa4.77□□□□□ -1.65
ITSN1-216ENST00000428240 TEX261Q6UWH6 196 aa4.77□□□□□ -1.65
ITSN1-216ENST00000428240 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
ITSN1-216ENST00000428240 hCG_2014768A0A024R1R8 64 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 C7orf77A4D0Y5 90 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 ARPC5O15511 151 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 H2AFB1P0C5Y9 115 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 POLR2KP53803 58 aaKnown RBP4.76□□□□□ -1.65
ITSN1-216ENST00000428240 TPRXLQ17RH7 258 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 UNQ6190/PRO20217Q6UXQ8 127 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 OR10D4PQ8NGN7 298 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 TYMSOSQ8TAI1 123 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 ORAOV1Q8WV07 137 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 SMIM12Q96EX1 92 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 SMDT1Q9H4I9 107 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 GNG13Q9P2W3 67 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 C6orf48Q9UBA6 75 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 UBE2D4Q9Y2X8 147 aa4.76□□□□□ -1.65
ITSN1-216ENST00000428240 Q6ZUT4 128 aa4.75□□□□□ -1.65
ITSN1-216ENST00000428240 SMIM15Q7Z3B0 74 aa4.75□□□□□ -1.65
ITSN1-216ENST00000428240 ST20Q9HBF5 79 aa4.75□□□□□ -1.65
ITSN1-216ENST00000428240 MANBALQ9NQG1 85 aa4.75□□□□□ -1.65
ITSN1-216ENST00000428240 ANAPC11Q9NYG5 84 aa4.75□□□□□ -1.65
ITSN1-216ENST00000428240 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
ITSN1-216ENST00000428240 UMAD1C9J7I0 102 aa4.74□□□□□ -1.65
ITSN1-216ENST00000428240 NDUFA1O15239 70 aa4.74□□□□□ -1.65
ITSN1-216ENST00000428240 TMEM241Q24JQ0 296 aa4.74□□□□□ -1.65
ITSN1-216ENST00000428240 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
ITSN1-216ENST00000428240 CSDC2Q9Y534 153 aaKnown RBP4.74□□□□□ -1.65
ITSN1-216ENST00000428240 IGLV7-46A0A075B6I9 117 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 IGHV3OR16-9A0A0B4J2B5 98 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 F8WDY8 70 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 K7EN84 100 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 CRYGAP11844 174 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 LINC01547P58512 204 aaPredicted RBP4.73□□□□□ -1.65
ITSN1-216ENST00000428240 KRTAP13-2Q52LG2 175 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 FAM210AQ96ND0 272 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 BIN3Q9NQY0 253 aa4.73□□□□□ -1.65
ITSN1-216ENST00000428240 SMLR1H3BR10 107 aa4.72□□□□□ -1.65
ITSN1-216ENST00000428240 FCER1GP30273 86 aa4.72□□□□□ -1.65
ITSN1-216ENST00000428240 SRSF3P84103 164 aaKnown RBP4.72□□□□□ -1.65
ITSN1-216ENST00000428240 FAM104AQ969W3 186 aa4.72□□□□□ -1.65
ITSN1-216ENST00000428240 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
ITSN1-216ENST00000428240 CTDSP1Q9GZU7 261 aa4.72□□□□□ -1.65
ITSN1-216ENST00000428240 MED9Q9NWA0 146 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms