RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RNASE13Q5GAN3 156 aaKnown RBP7.95□□□□□ -1.14
TCOF1-204ENST00000427724 RS1O15537 224 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 RNF152Q8N8N0 203 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 GAS8-AS1O95177 125 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 PRO0255Q9UI72 69 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 LENEPQ9Y5L5 61 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 NBEAQ8NFP9 2946 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 TRBV7-9A0A0J9YWB2 115 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 A4D1N5 150 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 TCL1BO95988 128 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 XCL1P47992 114 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 JPT2Q9H910 190 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 KLK12Q9UKR0 248 aa7.94□□□□□ -1.14
TCOF1-204ENST00000427724 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 U3KQK5 164 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 ADGRG4Q8IZF6 3080 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 A0A0J9YWU9 116 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 IGLV1-40P01703 118 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 S100A7L2Q5SY68 101 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 TMEM263Q8WUH6 116 aaKnown RBP7.93□□□□□ -1.14
TCOF1-204ENST00000427724 CARD19Q96LW7 228 aa7.93□□□□□ -1.14
TCOF1-204ENST00000427724 MIFP14174 115 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 Q6ZTI0 123 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 C16orf95Q9H693 158 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 TRAV10A0A0B4J240 114 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 NANOS2P60321 138 aaKnown RBP7.92□□□□□ -1.14
TCOF1-204ENST00000427724 GAGE2AQ6NT46 116 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 TIMM21Q9BVV7 248 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 NDUFV3P56181 108 aaKnown RBP7.92□□□□□ -1.14
TCOF1-204ENST00000427724 UBE2BP63146 152 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 IGHV4-28A0A0C4DH34 117 aa7.92□□□□□ -1.14
TCOF1-204ENST00000427724 I3L3M4 83 aa7.91□□□□□ -1.14
TCOF1-204ENST00000427724 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
TCOF1-204ENST00000427724 C9orf47Q6ZRZ4 202 aa7.91□□□□□ -1.14
TCOF1-204ENST00000427724 MDFICQ9P1T7 246 aa7.91□□□□□ -1.14
TCOF1-204ENST00000427724 NXPH4O95158 308 aa7.9□□□□□ -1.14
TCOF1-204ENST00000427724 RNF185Q96GF1 192 aa7.9□□□□□ -1.14
TCOF1-204ENST00000427724 VSIG2Q96IQ7 327 aa7.9□□□□□ -1.14
TCOF1-204ENST00000427724 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.14
TCOF1-204ENST00000427724 RPL39P62891 51 aaKnown RBP7.9□□□□□ -1.14
TCOF1-204ENST00000427724 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.14
TCOF1-204ENST00000427724 LINC01620Q4KN68 170 aa7.9□□□□□ -1.14
TCOF1-204ENST00000427724 SPANXA1Q9NS26 97 aa7.9□□□□□ -1.14
TCOF1-204ENST00000427724 FAM236AA0A1B0GUQ0 79 aa7.9□□□□□ -1.15
TCOF1-204ENST00000427724 FAM236BA0A1B0GV22 79 aa7.9□□□□□ -1.15
TCOF1-204ENST00000427724 SMIM9A6NGZ8 99 aa7.9□□□□□ -1.15
TCOF1-204ENST00000427724 PFN2P35080 140 aa7.9□□□□□ -1.15
TCOF1-204ENST00000427724 PRIMA1Q86XR5 153 aa7.89□□□□□ -1.15
TCOF1-204ENST00000427724 FLNCQ14315 2725 aa7.89□□□□□ -1.15
TCOF1-204ENST00000427724 C11orf86A6NJI1 115 aa7.89□□□□□ -1.15
TCOF1-204ENST00000427724 RASL10AQ92737 203 aa7.89□□□□□ -1.15
TCOF1-204ENST00000427724 C5orf38Q86SI9 138 aa7.89□□□□□ -1.15
TCOF1-204ENST00000427724 ZFAND3Q9H8U3 227 aa7.89□□□□□ -1.15
TCOF1-204ENST00000427724 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
TCOF1-204ENST00000427724 A0A096LNJ9 63 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
TCOF1-204ENST00000427724 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 TMEM141Q96I45 108 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 C11orf21Q9P2W6 132 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 MUC4Q99102 2169 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 K7EQD1 137 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 MRPS12O15235 138 aaKnown RBP7.88□□□□□ -1.15
TCOF1-204ENST00000427724 CFAP126Q5VTH2 177 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 TEX49A0A1B0GTD5 131 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 GATD1Q8NB37 220 aa7.88□□□□□ -1.15
TCOF1-204ENST00000427724 IGLV1-51P01701 117 aa7.87□□□□□ -1.15
TCOF1-204ENST00000427724 LYRM9A8MSI8 78 aa7.87□□□□□ -1.15
TCOF1-204ENST00000427724 EDN2P20800 178 aa7.87□□□□□ -1.15
TCOF1-204ENST00000427724 NKAPP1Q8N9T2 125 aa7.87□□□□□ -1.15
TCOF1-204ENST00000427724 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
TCOF1-204ENST00000427724 TRAV4A0A0B4J268 109 aa7.87□□□□□ -1.15
TCOF1-204ENST00000427724 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
TCOF1-204ENST00000427724 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
TCOF1-204ENST00000427724 TRAV12-1A0A0B4J245 112 aa7.86□□□□□ -1.15
TCOF1-204ENST00000427724 PRM2P04554 102 aa7.86□□□□□ -1.15
TCOF1-204ENST00000427724 RPL32P62910 135 aaKnown RBP7.86□□□□□ -1.15
TCOF1-204ENST00000427724 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
TCOF1-204ENST00000427724 TOMM6Q96B49 74 aa7.85□□□□□ -1.15
TCOF1-204ENST00000427724 RBMY1BA6NDE4 496 aaKnown RBP7.85□□□□□ -1.15
TCOF1-204ENST00000427724 RBMY1EA6NEQ0 496 aaKnown RBP7.85□□□□□ -1.15
TCOF1-204ENST00000427724 RBMY1DP0C7P1 496 aaKnown RBP7.85□□□□□ -1.15
TCOF1-204ENST00000427724 RBMY1A1P0DJD3 496 aaKnown RBP7.85□□□□□ -1.15
TCOF1-204ENST00000427724 RBMY1CP0DJD4 496 aa7.85□□□□□ -1.15
TCOF1-204ENST00000427724 ODF3L2Q3SX64 289 aa7.85□□□□□ -1.15
TCOF1-204ENST00000427724 UBR5O95071 2799 aaPredicted RBP7.85□□□□□ -1.15
TCOF1-204ENST00000427724 A0A0J9YXV3 536 aa7.84□□□□□ -1.15
TCOF1-204ENST00000427724 CLEC2BQ92478 149 aa7.84□□□□□ -1.15
TCOF1-204ENST00000427724 CAMK2N2Q96S95 79 aa7.84□□□□□ -1.15
TCOF1-204ENST00000427724 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
TCOF1-204ENST00000427724 OPRPNQ99935 248 aaPredicted RBP7.84□□□□□ -1.15
TCOF1-204ENST00000427724 CRYGDP07320 174 aa7.84□□□□□ -1.15
TCOF1-204ENST00000427724 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
TCOF1-204ENST00000427724 TRBV7-3A0A075B6L6 115 aa7.83□□□□□ -1.16
TCOF1-204ENST00000427724 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
TCOF1-204ENST00000427724 PRR9Q5T870 116 aa7.83□□□□□ -1.16
TCOF1-204ENST00000427724 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
TCOF1-204ENST00000427724 MDFIQ99750 246 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms