RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PPDPFQ9H3Y8 114 aa3.58□□□□□ -1.84
LINC00458-202ENST00000427299 IGLV4-69A0A075B6H9 119 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 LOC107984156A0A0G2JMH3 177 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 A0A0J9YY99 117 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 H3BUX3 64 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 J3QQQ9 107 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 LEPROTO15243 131 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 MSMBP08118 114 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 PRB4P10163 310 aaPredicted RBP3.57□□□□□ -1.84
LINC00458-202ENST00000427299 POLR2KP53803 58 aaKnown RBP3.57□□□□□ -1.84
LINC00458-202ENST00000427299 SMAGPQ0VAQ4 97 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 ETDBQ3ZM63 59 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 TMEM170BQ5T4T1 132 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 UNQ9165/PRO28630Q6UXU0 137 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 ARL17AQ8IVW1 177 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 C9orf85Q96MD7 179 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 JPT2Q9H910 190 aa3.57□□□□□ -1.84
LINC00458-202ENST00000427299 ZNF256Q9Y2P7 627 aaPredicted RBP3.57□□□□□ -1.84
LINC00458-202ENST00000427299 SPTBN1Q01082 2364 aaKnown RBP3.56□□□□□ -1.84
LINC00458-202ENST00000427299 NACAE9PAV3 2078 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 IGHV1OR15-1A0A075B7D0 117 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 TRAV2A0A0B4J234 112 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 IGIPA6NJ69 53 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 B4DSR2 109 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 I3L3M4 83 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 J3QLI3 93 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 RTL8CO15255 209 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 P0DMU3 169 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 FAM231AP0DMU4 169 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 FAM231CP0DMU5 169 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 ATXN8Q156A1 80 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 Q1RN00 199 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 FAM74A4Q5TZK3 123 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 MORN3Q6PF18 240 aaPredicted RBP3.56□□□□□ -1.84
LINC00458-202ENST00000427299 NDUFA11Q86Y39 141 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 SLC25A29Q8N8R3 303 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 C10orf105Q8TEF2 133 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 DCANP1Q8TF63 244 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 GTSF1LQ9H1H1 148 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 SPANXA1Q9NS26 97 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 PRO1854Q9UHT4 67 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 KIF25-AS1Q9Y6Z4 181 aa3.56□□□□□ -1.84
LINC00458-202ENST00000427299 LAMA5O15230 3695 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 M0R2P5 195 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 TRBV12-3P01733 135 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 IGHV3-11P01762 117 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 IGHV3-30P01768 117 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 COX6CP09669 75 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 IGHV3-30-5P0DP03 117 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 CD28P10747 220 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 PSMB8P28062 276 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 PSMB2P49721 201 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 WFDC2Q14508 124 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 BRD3OSQ6XYD6 125 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 ZNF418Q8TF45 676 aaPredicted RBP3.55□□□□□ -1.84
LINC00458-202ENST00000427299 TIMM21Q9BVV7 248 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 SPANXCQ9NY87 97 aa3.55□□□□□ -1.84
LINC00458-202ENST00000427299 LRBAP50851 2863 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 TRAV12-3A0A0B4J271 114 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 LOC100131303A0A0U1RQF7 123 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 TMEM223A0PJW6 202 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 H3BT86 120 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 TIMM17BO60830 172 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 CRYGDP07320 174 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 ZNF688P0C7X2 276 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
LINC00458-202ENST00000427299 ATP5J2P56134 94 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 LINC00315P59091 139 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 LY6EQ16553 131 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 AMTNQ6UX39 209 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 SBSPONQ8IVN8 264 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 C20orf203Q8NBC4 194 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 PTH2Q96A98 100 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 DNAJC30Q96LL9 226 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 LINC00527Q9UJ94 153 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 ERG28Q9UKR5 140 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 TACC2O95359 2948 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 DCHS2Q6V1P9 2916 aa3.54□□□□□ -1.84
LINC00458-202ENST00000427299 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 A0A0J9YXY3 114 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 A8MTW9 85 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 F6UB75 175 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 H3BMM0 161 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 M0QY20 66 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 GNRH2O43555 120 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 SLC25A20O43772 301 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 TCL1BO95988 128 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 INSP01308 110 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 IFITM1P13164 125 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
LINC00458-202ENST00000427299 MRPS36P82909 103 aaKnown RBP3.53□□□□□ -1.84
LINC00458-202ENST00000427299 REG3GQ6UW15 175 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 Q6ZUT4 128 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 ANKRD29Q8N6D5 301 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 TEX29Q8N6K0 151 aa3.53□□□□□ -1.84
LINC00458-202ENST00000427299 UBE2WQ96B02 151 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms