RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 OVOL2Q9BRP0 275 aa13.74□□□□□ -0.21
SNX17-202ENST00000427123 IGLV5-45A0A087WSX0 123 aa13.73□□□□□ -0.21
SNX17-202ENST00000427123 PF4P02776 101 aa13.73□□□□□ -0.21
SNX17-202ENST00000427123 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
SNX17-202ENST00000427123 LYRM7Q5U5X0 104 aa13.73□□□□□ -0.21
SNX17-202ENST00000427123 VPS25Q9BRG1 176 aa13.73□□□□□ -0.21
SNX17-202ENST00000427123 TRGV2A0A075B6R0 118 aa13.73□□□□□ -0.21
SNX17-202ENST00000427123 CSDC2Q9Y534 153 aaKnown RBP13.73□□□□□ -0.21
SNX17-202ENST00000427123 GAGE12JA6NER3 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE7O76087 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE12FP0CL80 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE12GP0CL81 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE12IP0CL82 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 SMAGPQ0VAQ4 97 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE4Q13068 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE5Q13069 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 GAGE13Q4V321 117 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 LINC00482Q8N8I6 264 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 NDUFA12Q9UI09 145 aa13.72□□□□□ -0.21
SNX17-202ENST00000427123 HELZ2Q9BYK8 2649 aaKnown RBP13.72□□□□□ -0.21
SNX17-202ENST00000427123 NTM-AS1Q6ZSK4 140 aa13.71□□□□□ -0.21
SNX17-202ENST00000427123 PRO1854Q9UHT4 67 aa13.71□□□□□ -0.21
SNX17-202ENST00000427123 A4D1N5 150 aa13.71□□□□□ -0.22
SNX17-202ENST00000427123 G3V4G9 280 aa13.71□□□□□ -0.22
SNX17-202ENST00000427123 SBSPONQ8IVN8 264 aa13.71□□□□□ -0.22
SNX17-202ENST00000427123 MTORP42345 2549 aa13.71□□□□□ -0.22
SNX17-202ENST00000427123 LINC00694P0DN24 101 aa13.7□□□□□ -0.22
SNX17-202ENST00000427123 MUSTN1Q8IVN3 82 aa13.7□□□□□ -0.22
SNX17-202ENST00000427123 LITAFQ99732 161 aa13.7□□□□□ -0.22
SNX17-202ENST00000427123 A0A0B4J2C4 111 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 TRBV6-4A0A1B0GX49 114 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 FAM19A3Q7Z5A8 133 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 GTSF1LQ9H1H1 148 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 LOC107984156A0A0G2JMH3 177 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 HERVK_113P63121 156 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 ARL17AQ8IVW1 177 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 PRO0461Q9UI25 63 aa13.69□□□□□ -0.22
SNX17-202ENST00000427123 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.68□□□□□ -0.22
SNX17-202ENST00000427123 WFDC2Q14508 124 aa13.68□□□□□ -0.22
SNX17-202ENST00000427123 SETXQ7Z333 2677 aaKnown RBP13.68□□□□□ -0.22
SNX17-202ENST00000427123 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
SNX17-202ENST00000427123 SPANXCQ9NY87 97 aa13.68□□□□□ -0.22
SNX17-202ENST00000427123 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
SNX17-202ENST00000427123 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
SNX17-202ENST00000427123 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
SNX17-202ENST00000427123 TMEM243Q9BU79 118 aa13.66□□□□□ -0.22
SNX17-202ENST00000427123 TRGV4A0A0C4DH28 118 aa13.66□□□□□ -0.22
SNX17-202ENST00000427123 A8MZ25 164 aa13.66□□□□□ -0.22
SNX17-202ENST00000427123 SFTA2Q6UW10 78 aa13.66□□□□□ -0.22
SNX17-202ENST00000427123 SETD2Q9BYW2 2564 aaPredicted RBP13.65□□□□□ -0.22
SNX17-202ENST00000427123 EIF4EBP3O60516 100 aaPredicted RBP13.65□□□□□ -0.22
SNX17-202ENST00000427123 PSMB2P49721 201 aa13.65□□□□□ -0.22
SNX17-202ENST00000427123 COX6A2Q02221 97 aa13.65□□□□□ -0.22
SNX17-202ENST00000427123 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.65□□□□□ -0.22
SNX17-202ENST00000427123 UBE2L6O14933 153 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 NDUFA1O15239 70 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 TIMM17BO60830 172 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 TMEM101Q96IK0 257 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 CDC42SE2Q9NRR3 84 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
SNX17-202ENST00000427123 TRBV20-1A0A075B6N2 111 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 H7C423 109 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 IGHV3-33P01772 117 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 MIAQ16674 131 aa13.64□□□□□ -0.23
SNX17-202ENST00000427123 IGLV5-39A0A0G2JS06 123 aa13.63□□□□□ -0.23
SNX17-202ENST00000427123 LOC100131303A0A0U1RQF7 123 aa13.63□□□□□ -0.23
SNX17-202ENST00000427123 INSL3P51460 131 aa13.63□□□□□ -0.23
SNX17-202ENST00000427123 FHL2Q14192 279 aa13.63□□□□□ -0.23
SNX17-202ENST00000427123 MTURNQ8N3F0 131 aa13.63□□□□□ -0.23
SNX17-202ENST00000427123 ADAMTSL4-AS1Q5T5F5 129 aa13.62□□□□□ -0.23
SNX17-202ENST00000427123 ERG28Q9UKR5 140 aa13.62□□□□□ -0.23
SNX17-202ENST00000427123 TRAV13-1A0A0B4J241 112 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 INAFM1C9JVW0 142 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 CRLF1O75462 422 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 TCL1BO95988 128 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 PRSS2P07478 247 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 ETDBQ3ZM63 59 aa13.61□□□□□ -0.23
SNX17-202ENST00000427123 PCP4P48539 62 aa13.6□□□□□ -0.23
SNX17-202ENST00000427123 KIR2DL5BQ8NHK3 375 aa13.6□□□□□ -0.23
SNX17-202ENST00000427123 SMIM1B2RUZ4 78 aa13.59□□□□□ -0.23
SNX17-202ENST00000427123 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
SNX17-202ENST00000427123 SH2D6Q7Z4S9 175 aa13.59□□□□□ -0.23
SNX17-202ENST00000427123 SCGB1C2P0DMR2 95 aa13.59□□□□□ -0.23
SNX17-202ENST00000427123 LINC00612Q8N6U2 182 aa13.59□□□□□ -0.23
SNX17-202ENST00000427123 RNF183Q96D59 192 aa13.59□□□□□ -0.23
SNX17-202ENST00000427123 J3QR89 54 aa13.58□□□□□ -0.24
SNX17-202ENST00000427123 IFITM1P13164 125 aa13.58□□□□□ -0.24
SNX17-202ENST00000427123 SMCPP49901 116 aaPredicted RBP13.57□□□□□ -0.24
SNX17-202ENST00000427123 NOTCH3Q9UM47 2321 aa13.56□□□□□ -0.24
SNX17-202ENST00000427123 SMIM9A6NGZ8 99 aa13.56□□□□□ -0.24
SNX17-202ENST00000427123 F5H768 121 aa13.56□□□□□ -0.24
SNX17-202ENST00000427123 H7C2G1 150 aa13.56□□□□□ -0.24
SNX17-202ENST00000427123 CIRBPQ14011 172 aaKnown RBP13.56□□□□□ -0.24
SNX17-202ENST00000427123 Q1RN00 199 aa13.56□□□□□ -0.24
SNX17-202ENST00000427123 ATP6V0E2Q8NHE4 81 aa13.56□□□□□ -0.24
SNX17-202ENST00000427123 Q9H8V8 135 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms