RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 HLA-DQA1P01909 254 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 APCSP02743 223 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 RBX1P62877 108 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 LINC00336Q6ZUF6 198 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 Q8N976 141 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 SMIM2Q9BVW6 85 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 KLK12Q9UKR0 248 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 LAMTOR2Q9Y2Q5 125 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 FRAS1Q86XX4 4008 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
LINC01049-201ENST00000426840 IGLV4-60A0A075B6I1 120 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.95□□□□□ -1.62
LINC01049-201ENST00000426840 IGKV2-29A2NJV5 120 aaPredicted RBP4.95□□□□□ -1.62
LINC01049-201ENST00000426840 H7C423 109 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 PKIAP61925 76 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 LAGE3Q14657 143 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 ENHOQ6UWT2 76 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 NFE4Q86UQ8 179 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 CBLN2Q8IUK8 224 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 C20orf203Q8NBC4 194 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 ALKBH7Q9BT30 221 aaPredicted RBP4.95□□□□□ -1.62
LINC01049-201ENST00000426840 SMCO4Q9NRQ5 59 aa4.95□□□□□ -1.62
LINC01049-201ENST00000426840 TRAV8-3A0A0A6YYJ7 113 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 LOC389332A0A1B0GUA5 103 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 TCAPO15273 167 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 MT-ND6P03923 174 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 ANGP03950 147 aaKnown RBP4.94□□□□□ -1.62
LINC01049-201ENST00000426840 FGF6P10767 208 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 FCER1GP30273 86 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 FABP9Q0Z7S8 132 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 FOXI1Q12951 378 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 Q8N8P6 123 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 KIR2DL4Q99706 377 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 Q9HAA7 133 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 PRR34Q9NV39 138 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
LINC01049-201ENST00000426840 EPPK1P58107 5090 aaKnown RBP4.94□□□□□ -1.62
LINC01049-201ENST00000426840 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 UBE2L6O14933 153 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 KRTAP26-1Q6PEX3 210 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 MRPL52Q86TS9 123 aaKnown RBP4.93□□□□□ -1.62
LINC01049-201ENST00000426840 LINC00269Q8N2A0 174 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 MAPKAPK5-AS1Q8N8E1 139 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 MAP1LC3AQ9H492 121 aa4.93□□□□□ -1.62
LINC01049-201ENST00000426840 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 COLCA2A8K830 154 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 IFI27P40305 119 aaPredicted RBP4.92□□□□□ -1.62
LINC01049-201ENST00000426840 REG3AQ06141 175 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 Q0VG73 95 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 AMMECR1LQ6DCA0 310 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 RNASEKQ6P5S7 137 aaKnown RBP4.92□□□□□ -1.62
LINC01049-201ENST00000426840 FAM104AQ969W3 186 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 TIMM21Q9BVV7 248 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 CDC42SE2Q9NRR3 84 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 UBE2D4Q9Y2X8 147 aa4.92□□□□□ -1.62
LINC01049-201ENST00000426840 LINC01546A6NGU7 62 aa4.91□□□□□ -1.62
LINC01049-201ENST00000426840 SCO1O75880 301 aa4.91□□□□□ -1.62
LINC01049-201ENST00000426840 ZNF25P17030 456 aaPredicted RBP4.91□□□□□ -1.62
LINC01049-201ENST00000426840 RAB5AP20339 215 aa4.91□□□□□ -1.62
LINC01049-201ENST00000426840 RPL39P62891 51 aaKnown RBP4.91□□□□□ -1.62
LINC01049-201ENST00000426840 MIAQ16674 131 aa4.91□□□□□ -1.62
LINC01049-201ENST00000426840 TM2D2Q9BX73 214 aa4.91□□□□□ -1.62
LINC01049-201ENST00000426840 NXT2Q9NPJ8 142 aaKnown RBP4.91□□□□□ -1.62
LINC01049-201ENST00000426840 CSDC2Q9Y534 153 aaKnown RBP4.91□□□□□ -1.62
LINC01049-201ENST00000426840 DYNC1H1Q14204 4646 aaKnown RBP4.9□□□□□ -1.62
LINC01049-201ENST00000426840 IGKV2D-24A0A075B6R9 120 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 A0A087WTM6 91 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 K7EMI3 77 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 CLPSL2Q6UWE3 100 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 ZNF664Q8N3J9 261 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 OR5A1Q8NGJ0 315 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 PRSS3P2Q8NHM4 247 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 C18orf32Q8TCD1 76 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 RMI2Q96E14 147 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 URB1-AS1Q96HZ7 61 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 TMEM101Q96IK0 257 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 COX11Q9Y6N1 276 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
LINC01049-201ENST00000426840 PKD1P98161 4303 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 TRAV8-4A0A0B4J246 113 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 LINC00959A0A1B0GUT2 108 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 PSCAO43653 123 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 CRPP02741 224 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 WFDC2Q14508 124 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 ORMDL2Q53FV1 153 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 DGAT2L7PQ6IED9 249 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 C2orf66Q6UXQ4 117 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 BAALCQ8WXS3 180 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
LINC01049-201ENST00000426840 PYGO1Q9Y3Y4 419 aa4.89□□□□□ -1.63
LINC01049-201ENST00000426840 IGLV10-54A0A075B6I4 117 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 IGKV3OR2-268A0A0C4DH90 116 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 IGIPA6NJ69 53 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 TRGC2P03986 189 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 S100A1P23297 94 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 MRPS36P82909 103 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms