RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TRAV26-1A0A087WT03 109 aa9.79□□□□□ -0.84
USP42-203ENST00000426246 TMEM262E9PQX1 116 aa9.79□□□□□ -0.84
USP42-203ENST00000426246 ADAMTSL4-AS1Q5T5F5 129 aa9.79□□□□□ -0.84
USP42-203ENST00000426246 SLC25A29Q8N8R3 303 aa9.79□□□□□ -0.84
USP42-203ENST00000426246 NOP10Q9NPE3 64 aaKnown RBP9.79□□□□□ -0.84
USP42-203ENST00000426246 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 A0A0J9YXY3 114 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 PRIMA1Q86XR5 153 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 ANAPC13Q9BS18 74 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 Q9H8V8 135 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 UBE2L6O14933 153 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 COX6CP09669 75 aa9.78□□□□□ -0.84
USP42-203ENST00000426246 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
USP42-203ENST00000426246 SNCGO76070 127 aa9.77□□□□□ -0.84
USP42-203ENST00000426246 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.84
USP42-203ENST00000426246 PPDPFLQ8WWR9 84 aa9.77□□□□□ -0.84
USP42-203ENST00000426246 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.85
USP42-203ENST00000426246 PFN2P35080 140 aa9.77□□□□□ -0.85
USP42-203ENST00000426246 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
USP42-203ENST00000426246 Q6ZTI0 123 aa9.77□□□□□ -0.85
USP42-203ENST00000426246 TIMM17AQ99595 171 aa9.77□□□□□ -0.85
USP42-203ENST00000426246 ZNF415Q09FC8 603 aa9.76□□□□□ -0.85
USP42-203ENST00000426246 ZNF702PQ9H963 129 aa9.76□□□□□ -0.85
USP42-203ENST00000426246 GAGE6Q13070 117 aa9.76□□□□□ -0.85
USP42-203ENST00000426246 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
USP42-203ENST00000426246 TEX29Q8N6K0 151 aa9.76□□□□□ -0.85
USP42-203ENST00000426246 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
USP42-203ENST00000426246 NBEAL1Q6ZS30 2694 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 LEPROTO15243 131 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 DEFB4AO15263 64 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 LOC100131303A0A0U1RQF7 123 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
USP42-203ENST00000426246 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
USP42-203ENST00000426246 LINC01619G3V211 115 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 H3BMM0 161 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 TRIAP1O43715 76 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
USP42-203ENST00000426246 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 LGALS9O00182 355 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 UBE2D1P51668 147 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 FHL3Q13643 280 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 CHCHD5Q9BSY4 110 aa9.75□□□□□ -0.85
USP42-203ENST00000426246 PRO0461Q9UI25 63 aa9.74□□□□□ -0.85
USP42-203ENST00000426246 IGHV3-33P01772 117 aa9.74□□□□□ -0.85
USP42-203ENST00000426246 Q8N2B8 174 aa9.74□□□□□ -0.85
USP42-203ENST00000426246 K7EMT4 169 aa9.74□□□□□ -0.85
USP42-203ENST00000426246 HTN3P15516 51 aa9.74□□□□□ -0.85
USP42-203ENST00000426246 C9orf85Q96MD7 179 aa9.74□□□□□ -0.85
USP42-203ENST00000426246 TRGV4A0A0C4DH28 118 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 LINC00694P0DN24 101 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 RNF183Q96D59 192 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 PEMTQ9UBM1 199 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 HIVEP1P15822 2718 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 LINC01546A6NGU7 62 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 B5MCH6 92 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 INSP01308 110 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
USP42-203ENST00000426246 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 MAP6D1Q9H9H5 199 aa9.73□□□□□ -0.85
USP42-203ENST00000426246 TRAV8-4A0A0B4J246 113 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 ATXN8Q156A1 80 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 LINC00158P58513 81 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 COX6A2Q02221 97 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 YAE1D1Q9NRH1 226 aa9.72□□□□□ -0.85
USP42-203ENST00000426246 CRLF1O75462 422 aa9.71□□□□□ -0.85
USP42-203ENST00000426246 TMEM89A2RUT3 159 aa9.71□□□□□ -0.86
USP42-203ENST00000426246 NXPH4O95158 308 aa9.71□□□□□ -0.86
USP42-203ENST00000426246 RHOHQ15669 191 aa9.71□□□□□ -0.86
USP42-203ENST00000426246 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
USP42-203ENST00000426246 RNF152Q8N8N0 203 aa9.71□□□□□ -0.86
USP42-203ENST00000426246 Q9HAA7 133 aa9.71□□□□□ -0.86
USP42-203ENST00000426246 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.7□□□□□ -0.86
USP42-203ENST00000426246 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 TRAV4A0A0B4J268 109 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 MED14OSP0DP75 135 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 CRYBA4P53673 196 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
USP42-203ENST00000426246 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
USP42-203ENST00000426246 CITED2Q99967 270 aaPredicted RBP9.7□□□□□ -0.86
USP42-203ENST00000426246 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 NOTCH1P46531 2555 aa9.7□□□□□ -0.86
USP42-203ENST00000426246 CDIP1Q9H305 208 aa9.69□□□□□ -0.86
USP42-203ENST00000426246 UBE2WQ96B02 151 aa9.68□□□□□ -0.86
USP42-203ENST00000426246 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
USP42-203ENST00000426246 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
USP42-203ENST00000426246 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
USP42-203ENST00000426246 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
USP42-203ENST00000426246 VWFP04275 2813 aa9.67□□□□□ -0.86
USP42-203ENST00000426246 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
USP42-203ENST00000426246 UBE2D3P61077 147 aa9.67□□□□□ -0.86
USP42-203ENST00000426246 UBE2D2P62837 147 aa9.67□□□□□ -0.86
USP42-203ENST00000426246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms