RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 STAB1Q9NY15 2570 aa7.77□□□□□ -1.17
CUX1-205ENST00000425244 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
CUX1-205ENST00000425244 ZFAND6Q6FIF0 208 aa7.77□□□□□ -1.17
CUX1-205ENST00000425244 IGHV3OR16-12A0A075B7B8 117 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 M0R2P5 195 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 ZNF415Q09FC8 603 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 FHL3Q13643 280 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 GAGE13Q4V321 117 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 Q6ZSN1 163 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 PTH2Q96A98 100 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 NACAE9PAV3 2078 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 FOXI1Q12951 378 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 PRO0461Q9UI25 63 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 CSDC2Q9Y534 153 aaKnown RBP7.76□□□□□ -1.17
CUX1-205ENST00000425244 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
CUX1-205ENST00000425244 NFE4Q86UQ8 179 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 XCL2Q9UBD3 114 aa7.76□□□□□ -1.17
CUX1-205ENST00000425244 TMEM223A0PJW6 202 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 RHODO00212 210 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 UBE2D1P51668 147 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 ADARB2-AS1A8MUL3 147 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 A8MWV9 139 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 F8WDY8 70 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 PSMB2P49721 201 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 DEFB114Q30KQ6 69 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 SLC25A29Q8N8R3 303 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 AMELXQ99217 191 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 COL6A5A8TX70 2615 aa7.75□□□□□ -1.17
CUX1-205ENST00000425244 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
CUX1-205ENST00000425244 TRAV2A0A0B4J234 112 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
CUX1-205ENST00000425244 IGHV3-30P01768 117 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 IGHV3-30-5P0DP03 117 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 LEPROTO15243 131 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 INSP01308 110 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 PF4P02776 101 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 CFAP126Q5VTH2 177 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 NDUFA11Q86Y39 141 aa7.74□□□□□ -1.17
CUX1-205ENST00000425244 ATP6V0E2Q8NHE4 81 aa7.73□□□□□ -1.17
CUX1-205ENST00000425244 PKD1L1Q8TDX9 2849 aa7.73□□□□□ -1.17
CUX1-205ENST00000425244 A8MTW9 85 aa7.72□□□□□ -1.17
CUX1-205ENST00000425244 H7C2G1 150 aa7.72□□□□□ -1.17
CUX1-205ENST00000425244 CFC1BP0CG36 223 aa7.72□□□□□ -1.17
CUX1-205ENST00000425244 CFC1P0CG37 223 aa7.72□□□□□ -1.17
CUX1-205ENST00000425244 TRAV8-3A0A0A6YYJ7 113 aa7.72□□□□□ -1.17
CUX1-205ENST00000425244 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
CUX1-205ENST00000425244 C11orf72Q8NBR9 251 aa7.72□□□□□ -1.17
CUX1-205ENST00000425244 STHQ8IWL8 128 aa7.71□□□□□ -1.17
CUX1-205ENST00000425244 TIMM21Q9BVV7 248 aa7.71□□□□□ -1.17
CUX1-205ENST00000425244 SCGB1C2P0DMR2 95 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 FAM104AQ969W3 186 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 LINC00467Q9BRT7 94 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 SPANXA1Q9NS26 97 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
CUX1-205ENST00000425244 TRGV1A0A0A0MS02 117 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 SPATA3Q8NHX4 192 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 PRO1854Q9UHT4 67 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 PYGO1Q9Y3Y4 419 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 A8MZ25 164 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 EDA2RQ9HAV5 297 aa7.7□□□□□ -1.18
CUX1-205ENST00000425244 TRBV20-1A0A075B6N2 111 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 PRSS2P07478 247 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 UBE2D3P61077 147 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 UBE2D2P62837 147 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 MRPS36P82909 103 aaKnown RBP7.69□□□□□ -1.18
CUX1-205ENST00000425244 LYRM7Q5U5X0 104 aa7.69□□□□□ -1.18
CUX1-205ENST00000425244 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
CUX1-205ENST00000425244 TCL1BO95988 128 aa7.68□□□□□ -1.18
CUX1-205ENST00000425244 Q1RN00 199 aa7.68□□□□□ -1.18
CUX1-205ENST00000425244 PRIMA1Q86XR5 153 aa7.68□□□□□ -1.18
CUX1-205ENST00000425244 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
CUX1-205ENST00000425244 NPC2P61916 151 aa7.68□□□□□ -1.18
CUX1-205ENST00000425244 DGAT2L7PQ6IED9 249 aa7.68□□□□□ -1.18
CUX1-205ENST00000425244 RS1O15537 224 aa7.67□□□□□ -1.18
CUX1-205ENST00000425244 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
CUX1-205ENST00000425244 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
CUX1-205ENST00000425244 EIF4EBP3O60516 100 aaPredicted RBP7.67□□□□□ -1.18
CUX1-205ENST00000425244 BEAN1Q3B7T3 259 aa7.67□□□□□ -1.18
CUX1-205ENST00000425244 PIK3CD-AS1Q5SR53 167 aa7.67□□□□□ -1.18
CUX1-205ENST00000425244 TMEM126AQ9H061 195 aa7.67□□□□□ -1.18
CUX1-205ENST00000425244 IGHV1-58A0A0C4DH39 117 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 GAGE2BQ13066 116 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 GAGE2EQ4V326 116 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 MEIG1Q5JSS6 88 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 GAGE2DQ9UEU5 116 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 NBEAL2Q6ZNJ1 2754 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 IFITM1P13164 125 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 Q6ZTI0 123 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
CUX1-205ENST00000425244 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms