RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 IFITM2Q01629 132 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 SMAGPQ0VAQ4 97 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 RHEBQ15382 184 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 ADIRFQ15847 76 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 C12orf74Q32Q52 190 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 SVBPQ8N300 66 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 C11orf72Q8NBR9 251 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 ISOC2Q96AB3 205 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 DNAJC30Q96LL9 226 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 AP1S3Q96PC3 154 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 DERL1Q9BUN8 251 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 NAT8BQ9UHF3 227 aa2.3□□□□□ -2.04
HDAC9-209ENST00000425071 HUWE1Q7Z6Z7 4374 aaKnown RBP2.3□□□□□ -2.04
HDAC9-209ENST00000425071 TGP01266 2768 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 TRBV20OR9-2A0A075B6H5 130 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 TMSB15BA0A087X1C1 80 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 A0A096LNJ9 63 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 GRIFINA4D1Z8 144 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 HIGD1CA8MV81 97 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 IGLL5B9A064 214 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 M0R381 172 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 DEFB4AO15263 64 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 TCAPO15273 167 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 PPBPP02775 128 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 RNASE3P12724 160 aaKnown RBP2.29□□□□□ -2.04
HDAC9-209ENST00000425071 HTN3P15516 51 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 NTF3P20783 257 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 RHOHQ15669 191 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 PRR9Q5T870 116 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 CFAP126Q5VTH2 177 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 RASL11AQ6T310 242 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 Q6ZTI0 123 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 NEGR1Q7Z3B1 354 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 ATP5L2Q7Z4Y8 100 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 COMMD7Q86VX2 200 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 CNFNQ9BYD5 112 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 RNASE7Q9H1E1 156 aaKnown RBP2.29□□□□□ -2.04
HDAC9-209ENST00000425071 DPH3P1Q9H4G8 78 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 RETNQ9HD89 108 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 COL7A1Q02388 2944 aa2.29□□□□□ -2.04
HDAC9-209ENST00000425071 DNAH7Q8WXX0 4024 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 TRBV7-3A0A075B6L6 115 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 TRAV26-1A0A087WT03 109 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 TRAV8-6A0A0B4J262 113 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 SMIM27A0A1W2PRY6 76 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 PLAC8L1A1L4L8 177 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 H3BVH4 76 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 K7EN84 100 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 IGLC6P0CF74 106 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 SRIP30626 198 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 NMUP48645 174 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 CRYBA4P53673 196 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 ELOBQ15370 118 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 C10orf91Q5T1B1 145 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 LGALS9CQ6DKI2 356 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 LYZL1Q6UWQ5 148 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 DAZ4Q86SG3 579 aaKnown RBP2.28□□□□□ -2.04
HDAC9-209ENST00000425071 TMEM191AQ9H0A3 160 aa2.28□□□□□ -2.04
HDAC9-209ENST00000425071 MRPL16Q9NX20 251 aaKnown RBP2.28□□□□□ -2.04
HDAC9-209ENST00000425071 CARHSP1Q9Y2V2 147 aaKnown RBP2.28□□□□□ -2.04
HDAC9-209ENST00000425071 TENM3Q9P273 2699 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 LINC01549A6NIU2 74 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 C9JQL5 133 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 APOC3P02656 99 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 MT-ND6P03923 174 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 PRM2P04554 102 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 CRYGDP07320 174 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 PRB4P10163 310 aaPredicted RBP2.27□□□□□ -2.05
HDAC9-209ENST00000425071 S100A1P23297 94 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 CKS2P33552 79 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 HBBP68871 147 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 ZNF56Q15929 161 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 FAM74A4Q5TZK3 123 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 Q6ZN92 141 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 UBE2DNLQ8IWF7 75 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 C10orf126Q8N4M7 172 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 SLC25A29Q8N8R3 303 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 NUP35Q8NFH5 326 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 ATP6V0E2Q8NHE4 81 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 MRAP2Q96G30 205 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 GTSF1LQ9H1H1 148 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 NIT2Q9NQR4 276 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 URGCP-MRPS24S4R325 110 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 V9GYV3 84 aa2.27□□□□□ -2.05
HDAC9-209ENST00000425071 C7orf77A4D0Y5 90 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 K7EMI3 77 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 NCR2O95944 276 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 GZMBP10144 247 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 RAB5AP20339 215 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 PMCHP20382 165 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 EVI2AP22794 236 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 TTC32Q5I0X7 151 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 FAM104BQ5XKR9 115 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 ZFAND6Q6FIF0 208 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 Q6ZQT7 251 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 TMEM136Q6ZRR5 245 aa2.26□□□□□ -2.05
HDAC9-209ENST00000425071 ORMDL3Q8N138 153 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms